RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ANXA10Q9UJ72 324 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 AMY1AP04745 511 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 OR8B8Q15620 311 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 ACSF3Q4G176 576 aaPredicted RBP5.93□□□□□ -1.46
UBR4-204ENST00000375254 LINC00346Q8IVM7 164 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 BHLHE23Q8NDY6 225 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 OR2V1Q8NHB1 315 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 RTP3Q9BQQ7 232 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 CD22P20273 847 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 DMKNQ6E0U4 476 aaPredicted RBP5.93□□□□□ -1.46
UBR4-204ENST00000375254 WNT16Q9UBV4 365 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 YBX2Q9Y2T7 364 aaKnown RBP5.93□□□□□ -1.46
UBR4-204ENST00000375254 PRTGQ2VWP7 1150 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 TMEM179BQ7Z7N9 219 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 SLC25A2Q9BXI2 301 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 KBTBD11-OT1A0A1B0GTJ5 212 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 TMEM8BA6NDV4 472 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 SNURFLB1AK76 121 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 GPX4P36969 197 aaPredicted RBP5.92□□□□□ -1.46
UBR4-204ENST00000375254 C5orf17Q8NAS9 161 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ATRNO75882 1429 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 C3orf85A0A1B0GTC6 90 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 NKX6-3A6NJ46 265 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 GAGE13Q4V321 117 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 RTL10Q7L3V2 364 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 Q8IYB0 196 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ZNF480Q8WV37 535 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 PRELID3AQ96N28 172 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 S1PR3Q99500 378 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 PRSS37A4D1T9 235 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 CDC14CA4D256 554 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ANKRD34CP0C6C1 535 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 LBX1P52954 281 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ZNF766Q5HY98 468 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 CLEC4CQ8WTT0 213 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ZFP64Q9NPA5 681 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 CLN8Q9UBY8 286 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 FXYD1O00168 92 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 AAMDCQ9H7C9 122 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 CTXND1A0A1B0GTU2 59 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ZFAND5O76080 213 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 C1orf220Q5T0J3 134 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 RGP1Q92546 391 aaPredicted RBP5.92□□□□□ -1.46
UBR4-204ENST00000375254 MMACHCQ9Y4U1 282 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ALG1L2C9J202 215 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 B4GALT3O60512 393 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 SLC2A10O95528 541 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 TSPAN7P41732 249 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 GPR3P46089 330 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ZNF595Q8IYB9 648 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ABHD3Q8WU67 409 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 DERL3Q96Q80 235 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 DCCP43146 1447 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 CRYM-AS1A6NIL9 109 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 CTSOP43234 321 aaPredicted RBP5.92□□□□□ -1.46
UBR4-204ENST00000375254 RBKSQ9H477 322 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 USP21Q9UK80 565 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 J3KRW8 73 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 CYB561D1Q8N8Q1 229 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 NXF5Q9H1B4 397 aaKnown RBP5.92□□□□□ -1.46
UBR4-204ENST00000375254 MED20Q9H944 212 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 COLCA2A8K830 154 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 J3QR06 171 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 APOBEC1P41238 236 aaKnown RBP5.92□□□□□ -1.46
UBR4-204ENST00000375254 IER3P46695 156 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 MFAP2P55001 183 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ELAVL3Q14576 367 aaKnown RBP5.92□□□□□ -1.46
UBR4-204ENST00000375254 TWIST1Q15672 202 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ADIPOQQ15848 244 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 PRR18Q8N4B5 295 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 PELI1Q96FA3 418 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ABCA5Q8WWZ7 1642 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 COX20Q5RI15 118 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 PLPPR1Q8TBJ4 325 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 TMEM189A5PLL7 270 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 LIPHQ8WWY8 451 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 FBXO17Q96EF6 278 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 PRDM13Q9H4Q3 707 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 FAM72CH0Y354 149 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ID2Q02363 134 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 ZNF542PQ5EBM4 170 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 FAM72AQ5TYM5 149 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 FAM72DQ6L9T8 149 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 FAM72BQ86X60 149 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 QTRT1Q9BXR0 403 aaKnown RBP5.92□□□□□ -1.46
UBR4-204ENST00000375254 DEFB126Q9BYW3 111 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 GLIPR2Q9H4G4 154 aa5.92□□□□□ -1.46
UBR4-204ENST00000375254 TMX2-CTNND1H3BSU7 103 aa5.91□□□□□ -1.46
UBR4-204ENST00000375254 TMEM176BQ3YBM2 270 aaPredicted RBP5.91□□□□□ -1.46
UBR4-204ENST00000375254 HEPN1Q6WQI6 88 aa5.91□□□□□ -1.46
UBR4-204ENST00000375254 SLC39A5Q6ZMH5 540 aa5.91□□□□□ -1.46
UBR4-204ENST00000375254 LIAT1Q6ZQX7 453 aa5.91□□□□□ -1.46
UBR4-204ENST00000375254 BCDIN3DQ7Z5W3 292 aaKnown RBP5.91□□□□□ -1.46
UBR4-204ENST00000375254 MMP25Q9NPA2 562 aa5.91□□□□□ -1.46
UBR4-204ENST00000375254 A0A0U1RQF3 1178 aa5.91□□□□□ -1.46
UBR4-204ENST00000375254 SNAI1O95863 264 aaPredicted RBP5.91□□□□□ -1.46
UBR4-204ENST00000375254 LAMTOR1Q6IAA8 161 aa5.91□□□□□ -1.46
UBR4-204ENST00000375254 OR51H1Q8NH63 302 aa5.91□□□□□ -1.46
UBR4-204ENST00000375254 ALKBH4Q9NXW9 302 aa5.91□□□□□ -1.46
UBR4-204ENST00000375254 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms