RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 OR1K1Q8NGR3 316 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 C14orf79Q96F83 325 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 ARV1Q9H2C2 271 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 TXNIPQ9H3M7 391 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 ACOT13Q9NPJ3 140 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 NECAP2Q9NVZ3 263 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 FAM53CQ9NYF3 392 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 RASL12Q9NYN1 266 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 ANXA10Q9UJ72 324 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 PIN1P1O15428 100 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 NCS1P62166 190 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 ZNF141Q15928 474 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 ACOT6Q3I5F7 207 aaPredicted RBP3.59□□□□□ -1.83
USH2A-202ENST00000366942 GGTA1PQ4G0N0 100 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 C17orf47Q8NEP4 570 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 OR4A4PQ8NGN8 299 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 OR14K1Q8NGZ2 314 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 RBMXL1Q96E39 390 aaKnown RBP3.59□□□□□ -1.83
USH2A-202ENST00000366942 PYURFQ96I23 114 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 ZNF426Q9BUY5 554 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 NMNAT2Q9BZQ4 307 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 SELENOIQ9C0D9 397 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 RNPEPL1Q9HAU8 725 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 C12orf10Q9HB07 376 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 SLCO1B3Q9NPD5 702 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 SLC7A10Q9NS82 523 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 TAS2R3Q9NYW6 316 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 NUMA1Q14980 2115 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 ST8SIA3O43173 380 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 ASAH2BP0C7U1 165 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 COX5BP10606 129 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 OPRK1P41145 380 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 PTH2RP49190 550 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 GNG10P50151 68 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 PITX1P78337 314 aaPredicted RBP3.59□□□□□ -1.83
USH2A-202ENST00000366942 SLAQ13239 276 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 FAM76BQ5HYJ3 339 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 TRNP1Q6NT89 227 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 C16orf82Q7Z2V1 217 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 ARIH2OSQ8N7S6 290 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 LKAAEAR1Q8TD35 194 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 PHYHIPQ92561 330 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 MARC2Q969Z3 335 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 ZNF501Q96CX3 271 aaPredicted RBP3.59□□□□□ -1.83
USH2A-202ENST00000366942 MS4A6EQ96DS6 147 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 MALSU1Q96EH3 234 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 MS4A3Q96HJ5 214 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 LPAR5Q9H1C0 372 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 MED28Q9H204 178 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 TCEAL2Q9H3H9 227 aaPredicted RBP3.59□□□□□ -1.83
USH2A-202ENST00000366942 PRNDQ9UKY0 176 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 YTHDF2Q9Y5A9 579 aaKnown RBP3.59□□□□□ -1.83
USH2A-202ENST00000366942 UNC13CQ8NB66 2214 aa3.59□□□□□ -1.83
USH2A-202ENST00000366942 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.59□□□□□ -1.84
USH2A-202ENST00000366942 A0A1B0GWA3 101 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 MPTX1A8MV57 137 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 SEC14L6B5MCN3 397 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 DCTN6O00399 190 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 CRXO43186 299 aaPredicted RBP3.59□□□□□ -1.84
USH2A-202ENST00000366942 UPK3AO75631 287 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 C1QL1O75973 258 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 FCER1GP30273 86 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 RPL27AP46776 148 aaKnown RBP3.59□□□□□ -1.84
USH2A-202ENST00000366942 SLC25A1P53007 311 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 MFAP4P55083 255 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 KANK2Q63ZY3 851 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 Q6ZT83 130 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 TMEM150AQ86TG1 271 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 TMEM256Q8N2U0 113 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 PACRGLQ8N7B6 248 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 OR52N4Q8NGI2 321 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 RAB40AQ8WXH6 277 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 PRADC1Q9BSG0 188 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 ST6GALNAC5Q9BVH7 336 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 HSD3B7Q9H2F3 369 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 PLSCR3Q9NRY6 295 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 TMEM106BQ9NUM4 274 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 PLLPQ9Y342 182 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 WASHC3Q9Y3C0 194 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 HILPDAQ9Y5L2 63 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 A0A1B0GU03 582 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 A0A1W2PNV4 684 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 OR11H12B2RN74 326 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 J3QT63 122 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 K7N7A8 449 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 IGHV4-34P06331 123 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 OR13C7P0DN81 318 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 MMP9P14780 707 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 PSMB1P20618 241 aaKnown RBP3.59□□□□□ -1.84
USH2A-202ENST00000366942 FUT3P21217 361 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 ANOS1P23352 680 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 IMPA1P29218 277 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 GPX4P36969 197 aaPredicted RBP3.59□□□□□ -1.84
USH2A-202ENST00000366942 VEGFCP49767 419 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 GTF2A1P52655 376 aaPredicted RBP3.59□□□□□ -1.84
USH2A-202ENST00000366942 P2RX3P56373 397 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 BAXQ07812 192 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 TMEM78Q5T7P6 136 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 B3GNT8Q7Z7M8 397 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 TSPYL5Q86VY4 417 aaPredicted RBP3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms