RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 CLEC18BQ6UXF7 455 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ESRP2Q9H6T0 727 aaKnown RBP4.08□□□□□ -1.76
VPS13C-201ENST00000249837 HEYLQ9NQ87 328 aaPredicted RBP4.08□□□□□ -1.76
VPS13C-201ENST00000249837 TNFSF18Q9UNG2 199 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 LAMP3Q9UQV4 416 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF732B4DXR9 585 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 TNFSF11O14788 317 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 SLC25A4P12235 298 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 RAB31Q13636 194 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 TMEM128Q5BJH2 165 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 TUBG2Q9NRH3 451 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 NKX2-6A6NCS4 301 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 PLXNA2O75051 1894 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 RBP2P50120 134 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 C17orf78Q8N4C9 275 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 TMEM104Q8NE00 496 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 OR8U1Q8NH10 309 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 PCOLCE2Q9UKZ9 415 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF727A8MUV8 499 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 SIRPB1O00241 398 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 HMGB3O15347 200 aaKnown RBP4.08□□□□□ -1.76
VPS13C-201ENST00000249837 LAMTOR5O43504 91 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 CD1AP06126 327 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 OR5AC1P0C628 307 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 GABRA2P47869 451 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 IGLV1-36A0A0B4J1U3 117 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 BTCP35070 178 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 CEACAM16Q2WEN9 425 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ANKRD55Q3KP44 614 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 OR2T2Q6IF00 324 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 OR8B12Q8NGG6 310 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 HPSE2Q8WWQ2 592 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 NANOS1Q8WY41 292 aaKnown RBP4.08□□□□□ -1.76
VPS13C-201ENST00000249837 GNG12Q9UBI6 72 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 FAM24AA6NFZ4 105 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 VAMP5O95183 116 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 FCARP24071 287 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 FABP9Q0Z7S8 132 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 GUSBP11Q6P575 273 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF429Q86V71 674 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 GFI1Q99684 422 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 SOX15O60248 233 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ZBTB25P24278 435 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 RPS11P62280 158 aaKnown RBP eCLIP4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF610Q8N9Z0 462 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 MVB12AQ96EY5 273 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 PLA2G3Q9NZ20 509 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 GHRLQ9UBU3 117 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 C7orf77A4D0Y5 90 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 WDR1O75083 606 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 NXPH2O95156 264 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 SUMO3P55854 103 aaPredicted RBP4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF485Q8NCK3 441 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ALKBH3Q96Q83 286 aaPredicted RBP4.08□□□□□ -1.76
VPS13C-201ENST00000249837 WDR13Q9H1Z4 485 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 MED12LQ86YW9 2145 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 IGHV1OR15-9A0A0B4J2B8 117 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ASAH2BP0C7U1 165 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 SYT13Q7L8C5 426 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 MRGPRX4Q96LA9 322 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 UCN2Q96RP3 112 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 PIGQQ9BRB3 760 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 CYB5R1Q9UHQ9 305 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 EML5Q05BV3 1969 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 A0A087WZY1 265 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF98A6NK75 572 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 FOXK1P85037 733 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 RSPO4Q2I0M5 234 aaPredicted RBP4.08□□□□□ -1.76
VPS13C-201ENST00000249837 NHLRC3Q5JS37 347 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 RPUSD4Q96CM3 377 aaKnown RBP4.08□□□□□ -1.76
VPS13C-201ENST00000249837 PRO1933Q9H354 126 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 UFSP2Q9NUQ7 469 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 OR5AC2Q9NZP5 309 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 DNAJB11Q9UBS4 358 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 PTPN13Q12923 2485 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 MEX3AA1L020 520 aaKnown RBP4.08□□□□□ -1.76
VPS13C-201ENST00000249837 CDRT15L2A8MXV6 281 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF814B7Z6K7 855 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ADAM20O43506 726 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF528Q3MIS6 628 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 PIGYQ3MUY2 71 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 PDLIM3Q53GG5 364 aaPredicted RBP4.08□□□□□ -1.76
VPS13C-201ENST00000249837 IFI44Q8TCB0 444 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 ARL5BQ96KC2 179 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 C12orf49Q9H741 205 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 PTPRQQ9UMZ3 2332 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 TRAV39A0A0B4J263 110 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 C1orf53Q5VUE5 145 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 C9orf40Q8IXQ3 194 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 OR10J5Q8NHC4 309 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 MENTQ9BUN1 341 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 DUSP23Q9BVJ7 150 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 NOSIPQ9Y314 301 aaKnown RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 ECI1P42126 302 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 NPBWR1P48145 328 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 FGF8P55075 233 aaPredicted RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 ERVK-16P61578 105 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 PMP22Q01453 160 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 RBMS3Q6XE24 437 aaKnown RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 SLC35B3Q9H1N7 401 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms