RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 MSTNO14793 375 aa15.27■□□□□ 0.04
SCARF1-205ENST00000571272 SGCEO43556 437 aa15.27■□□□□ 0.04
SCARF1-205ENST00000571272 DHRS3O75911 302 aa15.27■□□□□ 0.04
SCARF1-205ENST00000571272 GAPDHP04406 335 aaKnown RBP15.27■□□□□ 0.04
SCARF1-205ENST00000571272 OR5H8P0DN80 308 aa15.27■□□□□ 0.04
SCARF1-205ENST00000571272 TAF9Q16594 264 aa15.27■□□□□ 0.04
SCARF1-205ENST00000571272 NKAIN1Q4KMZ8 207 aa15.27■□□□□ 0.04
SCARF1-205ENST00000571272 PHYHD1Q5SRE7 291 aa15.27■□□□□ 0.04
SCARF1-205ENST00000571272 CDCP2Q5VXM1 449 aa15.27■□□□□ 0.04
SCARF1-205ENST00000571272 OPN5Q6U736 354 aa15.27■□□□□ 0.04
SCARF1-205ENST00000571272 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.27■□□□□ 0.04
SCARF1-205ENST00000571272 SPACA1Q9HBV2 294 aa15.27■□□□□ 0.04
SCARF1-205ENST00000571272 TUBD1Q9UJT1 453 aa15.27■□□□□ 0.04
SCARF1-205ENST00000571272 C7orf77A4D0Y5 90 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 CRYM-AS1A6NIL9 109 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 MBPP02686 304 aaPredicted RBP15.27■□□□□ 0.03
SCARF1-205ENST00000571272 ZNF84P51523 738 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 NXPH1P58417 271 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 FXYD4P59646 89 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 FAM3AP98173 230 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 HIST3H3Q16695 136 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 SLC25A53Q5H9E4 307 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 BRICD5Q6PL45 260 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 C20orf196Q8IYI0 205 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 WDR77Q9BQA1 342 aaPredicted RBP15.27■□□□□ 0.03
SCARF1-205ENST00000571272 PIGQQ9BRB3 760 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 RGCCQ9H4X1 137 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 FAM212BQ9NTI7 297 aaPredicted RBP15.27■□□□□ 0.03
SCARF1-205ENST00000571272 MYOTQ9UBF9 498 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 EML6Q6ZMW3 1958 aa15.27■□□□□ 0.03
SCARF1-205ENST00000571272 IGHV3-15A0A0B4J1V0 119 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 ZNF850A8MQ14 1090 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 CTSDP07339 412 aaPredicted RBP15.26■□□□□ 0.03
SCARF1-205ENST00000571272 FOLR2P14207 255 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 MSX1P28360 303 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 S100A12P80511 92 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 GUK1Q16774 197 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 RPUSD3Q6P087 351 aaKnown RBP15.26■□□□□ 0.03
SCARF1-205ENST00000571272 OR2M3Q8NG83 312 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 DYRK2Q92630 601 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 HAS2Q92819 552 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 REEP6Q96HR9 211 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 TM2D1Q9BX74 207 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 LMAN1LQ9HAT1 526 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 GPR173Q9NS66 373 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 ANXA10Q9UJ72 324 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 A0A1W2PPH5 198 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 SNCAP37840 140 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 ALDH3B1P43353 468 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 KCNMB1Q16558 191 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 RSPO1Q2MKA7 263 aaPredicted RBP15.26■□□□□ 0.03
SCARF1-205ENST00000571272 RHBDD2Q6NTF9 364 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 SMRP1Q8NCR6 262 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 TGIF2Q9GZN2 237 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 CHST5Q9GZS9 411 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 WFDC1Q9HC57 220 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 NXT1Q9UKK6 140 aaKnown RBP15.26■□□□□ 0.03
SCARF1-205ENST00000571272 STARD10Q9Y365 291 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 POMT1Q9Y6A1 747 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 FAM221AA4D161 298 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 C5orf52A6NGY3 159 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 SPRY1O43609 319 aaPredicted RBP15.26■□□□□ 0.03
SCARF1-205ENST00000571272 OR5AC1P0C628 307 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 PHLDA2Q53GA4 152 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 NSUN5P2Q63ZY6 315 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 LYZL2Q7Z4W2 148 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 UBAC2Q8NBM4 344 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 ADPRHL1Q8NDY3 354 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 LYPD6BQ8NI32 183 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 RBM24Q9BX46 236 aaKnown RBP15.26■□□□□ 0.03
SCARF1-205ENST00000571272 EGLN1Q9GZT9 426 aa15.26■□□□□ 0.03
SCARF1-205ENST00000571272 hCG_1809904A0A1W2PP81 198 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 A0A1W2PR64 198 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 A0A1W2PRV1 198 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 TLX3O43711 291 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-205ENST00000571272 PRH1P02810 166 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 MSR1P21757 451 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 CAMLGP49069 296 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 MTCP1P56278 107 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 SLC16A14Q7RTX9 510 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 SLC25A45Q8N413 288 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 OR5L2Q8NGL0 311 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 SH3BGRL3Q9H299 93 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 AQP7P3A6NL99 342 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 LINC00587B1AMM8 73 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 MASP2O00187 686 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 ARG1P05089 322 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 HOXB1P14653 301 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-205ENST00000571272 GLB1P16278 677 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 CSNK1A1P48729 337 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 PPP1R3BQ86XI6 285 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 WDSUB1Q8N9V3 476 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 HSD17B11Q8NBQ5 300 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 GJC3Q8NFK1 279 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 OR2AE1Q8NHA4 323 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 RSRP1Q9BUV0 290 aa15.25■□□□□ 0.03
SCARF1-205ENST00000571272 IGLV3-1P01715 115 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 ZNF14P17017 642 aaPredicted RBP15.24■□□□□ 0.03
SCARF1-205ENST00000571272 ASCL1P50553 236 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 ENDOGQ14249 297 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms