RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 RPRMLQ8N4K4 120 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 PLPP7Q8NBV4 271 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 SNRNP40Q96DI7 357 aaKnown RBP7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 WFIKKN1Q96NZ8 548 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 HDGFL3Q9Y3E1 203 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 TSPAN15O95858 294 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 MT-ATP6P00846 226 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 MGMTP16455 207 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 TAS2R20P59543 309 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 NKX6-1P78426 367 aaPredicted RBP7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF626Q68DY1 528 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 EXD3Q8N9H8 876 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 OR5T1Q8NG75 326 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 NPRL2Q8WTW4 380 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 MIB2Q96AX9 1013 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 WBP1Q96G27 269 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 TCEAL7Q9BRU2 100 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF426Q9BUY5 554 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 ULBP2Q9BZM5 246 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 MED9Q9NWA0 146 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 GAR1Q9NY12 217 aaKnown RBP7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 ITPR1Q14643 2758 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 BHLHE40O14503 412 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 CYB5AP00167 134 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 PRB1P04280 392 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF823P16415 610 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 RCC1P18754 421 aaPredicted RBP7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 CSNK1A1P48729 337 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 CDK5Q00535 292 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 DPY19L4Q7Z388 723 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 GLB1L2Q8IW92 636 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 GPR137CQ8N3F9 429 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 ARIH2OSQ8N7S6 290 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNRF4Q8WWF5 429 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 V9GY05 133 aa7.62□□□□□ -1.19
LIMCH1-209ENST00000509277 MED12LQ86YW9 2145 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 PQLC2LA1A4F0 135 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 OR4E1P0C645 316 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 TPT1P13693 172 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 CTLA4P16410 223 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 SRMP19623 302 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 AGTR1P30556 359 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 POU3F4P49335 361 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 B3GALT5-AS1P59052 145 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 PYY3Q5JQD4 70 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 RPL13AP3Q6NVV1 102 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 COMMD2Q86X83 199 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 WDFY1Q8IWB7 410 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF561Q8N587 486 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 PNPLA2Q96AD5 504 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 SARAFQ96BY9 339 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 ADAD1Q96M93 576 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 ALG12Q9BV10 488 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 WDR76Q9H967 626 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 TUBG2Q9NRH3 451 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 B3GALT5Q9Y2C3 310 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF462Q96JM2 2506 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 HEATR1Q9H583 2144 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 PPP1R2P9O14990 202 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 C1QL1O75973 258 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 SCGNO76038 276 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 KNG1P01042 644 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 GUSBP08236 651 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 BMP5P22003 454 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 PRSS3P35030 304 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 LHX2P50458 406 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 RAC3P60763 192 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 FAM189A2Q15884 450 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 BPIFB2Q8N4F0 458 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 OR9K2Q8NGE7 335 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 PHYHIPQ92561 330 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 FOXRED1Q96CU9 486 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 POTEKPQ9BYX7 375 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 CMC2Q9NRP2 79 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 CPAMD8Q8IZJ3 1885 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 ADGRG4Q8IZF6 3080 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 IGKV1D-43A0A0B4J1Z2 117 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 ARRDC5A6NEK1 342 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 MPTX1A8MV57 137 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 RNASEK-C17orf49H0YIS7 233 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 K7EPK0 472 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 KLF4O43474 513 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 IGHG1P01857 330 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 B4GALT1P15291 398 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 GLP1RP43220 463 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 RAB5CP51148 216 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 DAP3P51398 398 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 MEF2DQ14814 521 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 GGNQ86UU5 652 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 FAM71E2Q8N5Q1 922 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 HSD17B11Q8NBQ5 300 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 RNF141Q8WVD5 230 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 HIST1H2BAQ96A08 127 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 SLC25A38Q96DW6 304 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF837Q96EG3 531 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 C14orf144Q96I85 54 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 TEAD3Q99594 435 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 SOSTQ9BQB4 213 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 FAM117AQ9C073 453 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 TXNIPQ9H3M7 391 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms