RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 FAM27D1Q5T7N8 215 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 RIPPLY2Q5TAB7 128 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 TMEM244Q5VVB8 128 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 TMEM53Q6P2H8 277 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 SFXN4Q6P4A7 337 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 DEGS2Q6QHC5 323 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 FAM131AQ6UXB0 335 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 TMEM91Q6ZNR0 172 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC16A14Q7RTX9 510 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 CATSPERDQ86XM0 798 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 LAX1Q8IWV1 398 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 TUSC5Q8IXB3 177 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 CIARTQ8N365 385 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF433Q8N7K0 673 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF671Q8TAW3 534 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 TRMT10AQ8TBZ6 339 aaKnown RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 RPS4Y2Q8TD47 263 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 ST7LQ8TDW4 575 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 RNF133Q8WVZ7 376 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 HSD17B8Q92506 261 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 SPTSSAQ969W0 71 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 TMEM106AQ96A25 262 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 WBP1Q96G27 269 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 PGAM5Q96HS1 289 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 DIRAS2Q96HU8 199 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 DERL3Q96Q80 235 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF416Q9BWM5 594 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 LINC00470Q9BZP3 86 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 NXF2Q9GZY0 626 aaKnown RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 HDHD2Q9H0R4 259 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 RNF121Q9H920 327 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 SP140LQ9H930 580 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 RNF122Q9H9V4 155 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 CRLF2Q9HC73 371 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 TMEM38BQ9NVV0 291 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 COMMD3Q9UBI1 195 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 CYB5R1Q9UHQ9 305 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 DAPK2Q9UIK4 370 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 RALYQ9UKM9 306 aaKnown RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 HHLA2Q9UM44 414 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC22A13Q9Y226 551 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 AMDHD2Q9Y303 409 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 AK6Q9Y3D8 172 aaKnown RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF175Q9Y473 711 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 UGT2A1Q9Y4X1 527 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 OTOGLQ3ZCN5 2332 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 MED13Q9UHV7 2174 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 LAMA1P25391 3075 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 ARPC4-TTLL3A0A0A6YYG9 625 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 TRBV5-5A0A0J9YX44 114 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 A0A1B0GTH9 108 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 F5H5K5 113 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 K7ENP7 123 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 M0R135 149 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 DVL1O14640 695 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 RER1O15258 196 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 SGCEO43556 437 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 SYT7O43581 403 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 HPGDSO60760 199 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZG16O60844 167 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 SS18L1O75177 396 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 SC5DO75845 299 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 UBL3O95164 117 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 RAF1P04049 648 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 MAS1P04201 325 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 TPOP07202 933 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 YES1P07947 543 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC2A1P11166 492 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 ABOP16442 354 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF32P17041 273 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 SRMP19623 302 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 RANBP1P43487 201 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 PSMD7P51665 324 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 PPP5CP53041 499 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 DVL1P1P54792 670 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR10A3P58181 314 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 DEFA1P59665 94 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 DEFA3P59666 94 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 RPS11P62280 158 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 SORDQ00796 357 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 ECH1Q13011 328 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 IL18Q14116 193 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 ENDOGQ14249 297 aaKnown RBP3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 STK11Q15831 433 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 RGS21Q2M5E4 152 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 HES5Q5TA89 166 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 TSPO2Q5TGU0 170 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 C9orf135Q5VTT2 229 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 TRIQKQ629K1 86 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 GLT8D1Q68CQ7 371 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR2A2Q6IF42 318 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 INO80CQ6PI98 192 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 PLXDC2Q6UX71 529 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 IGFL3Q6UXB1 125 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 NHLRC1Q6VVB1 395 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 Q6ZS92 163 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR8H2Q8N162 312 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 PRSS35Q8N3Z0 413 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC22A24Q8N4F4 322 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 NKAIN3Q8N8D7 197 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms