RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 OMGP23515 440 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 SRP9P49458 86 aaKnown RBP4.28□□□□□ -1.72
CAST-201ENST00000309190 H2BFSP57053 126 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 DMRTA1Q5VZB9 504 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 SFXN4Q6P4A7 337 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 HAGHLQ6PII5 290 aaPredicted RBP4.28□□□□□ -1.72
CAST-201ENST00000309190 MEX3BQ6ZN04 569 aaKnown RBP4.28□□□□□ -1.72
CAST-201ENST00000309190 RNF113BQ8IZP6 322 aaKnown RBP4.28□□□□□ -1.72
CAST-201ENST00000309190 NOXO1Q8NFA2 376 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 OR56B2PQ8NGI1 322 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 ASB10Q8WXI3 467 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 HDHD2Q9H0R4 259 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 ABCG5Q9H222 651 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 WASF3Q9UPY6 502 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 DYSFO75923 2080 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 HIVEP1P15822 2718 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 F5H5P2 479 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 SRSF10O75494 262 aaKnown RBP4.28□□□□□ -1.72
CAST-201ENST00000309190 TCRBP04435 133 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 ACSM4P0C7M7 580 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 FCGR2AP12318 317 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 ADCYAP1P18509 176 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 STOMP27105 288 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 CRABP1P29762 137 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 WDR38Q5JTN6 314 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 PLCXD3Q63HM9 321 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 ZNF626Q68DY1 528 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 RTL6Q6ICC9 239 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 DNM1P34Q6PK57 102 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 FAM131AQ6UXB0 335 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 TPRA1Q86W33 373 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 LRRC75AQ8NAA5 344 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 SLC25A43Q8WUT9 341 aaPredicted RBP4.28□□□□□ -1.72
CAST-201ENST00000309190 UFD1Q92890 307 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 PNPLA2Q96AD5 504 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 MRPS24Q96EL2 167 aaKnown RBP4.28□□□□□ -1.72
CAST-201ENST00000309190 PERPQ96FX8 193 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 WFIKKN1Q96NZ8 548 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 WDR13Q9H1Z4 485 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 SH2D2AQ9NP31 389 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 POLE3Q9NRF9 147 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 TAS2R4Q9NYW5 299 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 ZNF581Q9P0T4 197 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 MRM2Q9UI43 246 aaKnown RBP4.28□□□□□ -1.72
CAST-201ENST00000309190 GSTK1Q9Y2Q3 226 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 NUBP2Q9Y5Y2 271 aa4.28□□□□□ -1.72
CAST-201ENST00000309190 A0A1B0GUH1 482 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 ANKRD20A5PA0PJZ0 165 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 H0YL77 283 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 C19orf84I3L1E1 186 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 GMDSO60547 372 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 OR7C1O76099 320 aaPredicted RBP4.27□□□□□ -1.73
CAST-201ENST00000309190 GLCEO94923 617 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 TMEM11P17152 192 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 MAPK3P27361 379 aaPredicted RBP4.27□□□□□ -1.73
CAST-201ENST00000309190 SNRPD2P62316 118 aaKnown RBP4.27□□□□□ -1.73
CAST-201ENST00000309190 MAB21L1Q13394 359 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 HNF4GQ14541 408 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 MPPED2Q15777 294 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 TAF9Q16594 264 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 FBXW9Q5XUX1 488 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 KCTD18Q6PI47 426 aaPredicted RBP4.27□□□□□ -1.73
CAST-201ENST00000309190 FIP1L1Q6UN15 594 aaKnown RBP4.27□□□□□ -1.73
CAST-201ENST00000309190 STAC2Q6ZMT1 411 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 SEM1Q6ZVN7 128 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 SLC16A9Q7RTY1 509 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 FADS6Q8N9I5 356 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 SLC30A7Q8NEW0 376 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 DIRAS2Q96HU8 199 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 THAP7Q9BT49 309 aaPredicted RBP4.27□□□□□ -1.73
CAST-201ENST00000309190 MYOZ1Q9NP98 299 aaPredicted RBP4.27□□□□□ -1.73
CAST-201ENST00000309190 BABAM2Q9NXR7 383 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 CRIM1Q9NZV1 1036 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 IL36RNQ9UBH0 155 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 DKK4Q9UBT3 224 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 ADAM30Q9UKF2 790 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 DHDHQ9UQ10 334 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 RBM7Q9Y580 266 aaKnown RBP4.27□□□□□ -1.73
CAST-201ENST00000309190 LHFPL6Q9Y693 200 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 POMT1Q9Y6A1 747 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 TRAV8-7A0A075B6U6 113 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 LOC107986453A0A1B0GWG9 222 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 HMSDA8MTL9 139 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 TOR1AO14656 332 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 CDIPTO14735 213 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 ZNF254O75437 659 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 IGF2P01344 180 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 CD3GP09693 182 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 PRKACBP22694 351 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 MPZP25189 248 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 OPRM1P35372 400 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 UCNP55089 124 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 MTCP1P56278 107 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 B2MP61769 119 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 ZNF92Q03936 586 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 C3orf36Q3SXR2 165 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 GLYATL3Q5SZD4 288 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 ZNF57Q68EA5 555 aaPredicted RBP4.27□□□□□ -1.73
CAST-201ENST00000309190 LRRTM1Q86UE6 522 aa4.27□□□□□ -1.73
CAST-201ENST00000309190 SUN5Q8TC36 379 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms