RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 TRAV17A0A0B4J275 112 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 MFSD2BA6NFX1 497 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 TLCD2A6NGC4 264 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 E5RGE8 158 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF593O00488 134 aaPredicted RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 OR1F1O43749 312 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 SH3BGRLO75368 114 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 RP2O75695 350 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 KRT33AO76009 404 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 MELTFP08582 738 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 SLC35G4P0C7Q5 338 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 IGHV4-31P0DP07 118 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 IRF2P14316 349 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 SLC2A5P22732 501 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 ATP5A1P25705 553 aaKnown RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 GIFP27352 417 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 PBLDP30039 288 aaPredicted RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 NUP62P37198 522 aaPredicted RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 SNRPD2P62316 118 aaKnown RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 DLK1P80370 383 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 TSTA3Q13630 321 aaPredicted RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 LASP1Q14847 261 aaKnown RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 CDK5R1Q15078 307 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF791Q3KP31 576 aaPredicted RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 LGALSLQ3ZCW2 172 aaPredicted RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 ACSM3Q53FZ2 586 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 NKAIN2Q5VXU1 208 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 WDR88Q6ZMY6 472 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 DNM1P46Q6ZS02 220 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 CDH26Q8IXH8 852 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 NRMQ8IXM6 262 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 CCDC36Q8IYA8 594 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 SLC38A6Q8IZM9 456 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 MFSD9Q8NBP5 474 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 NT5CQ8TCD5 201 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 SMAP2Q8WU79 429 aaPredicted RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF501Q96CX3 271 aaPredicted RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 GIMAP5Q96F15 307 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 PGLYRP3Q96LB9 341 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 DUX5Q96PT3 197 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 RBP7Q96R05 134 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 ALX4Q9H161 411 aaPredicted RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 RIMS4Q9H426 269 aaPredicted RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 MYOZ1Q9NP98 299 aaPredicted RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 SLC17A5Q9NRA2 495 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 FGF21Q9NSA1 209 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 TEX10Q9NXF1 929 aaPredicted RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 NXT1Q9UKK6 140 aaKnown RBP3.56□□□□□ -1.84
LINC00561-201ENST00000565815 NSG2Q9Y328 171 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 MED31Q9Y3C7 131 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 PYGO1Q9Y3Y4 419 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 PCM1Q15154 2024 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 BPTFQ12830 3046 aa3.56□□□□□ -1.84
LINC00561-201ENST00000565815 KNL1Q8NG31 2342 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 C2orf92A0A1B0GVN3 265 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 A0A1W2PPV9 198 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 C5orf52A6NGY3 159 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 CPSF4LA6NMK7 179 aaKnown RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 A8MXK9 166 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 L7N2F9 121 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 AIPO00170 330 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 RTCAO00442 366 aaKnown RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 TSC22D2O75157 780 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 HOXD4P09016 255 aaPredicted RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 PRG2P13727 222 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 NFYAP23511 347 aaPredicted RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 SHC1P29353 583 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 CMPK1P30085 196 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 AGTR1P30556 359 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 CAPZBP47756 277 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 BLVRAP53004 296 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 PSMD4P55036 377 aaKnown RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 CAV3P56539 151 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 TSPAN5P62079 268 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 FGL1Q08830 312 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 PRR30Q53SZ7 412 aaPredicted RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 LPCAT3Q6P1A2 487 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ARL9Q6T311 187 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 FRRS1Q6ZNA5 592 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF547Q8IVP9 402 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF619Q8N2I2 560 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 OR2L13Q8N349 312 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 LRRC25Q8N386 305 aaPredicted RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 FTMTQ8N4E7 242 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF740Q8NDX6 193 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 OR10H4Q8NGA5 316 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 OR10V1Q8NGI7 309 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 OR51G2Q8NGK0 314 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 OR2T35Q8NGX2 323 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 TMEM239Q8WW34 195 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 MS4A6EQ96DS6 147 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 S100A16Q96FQ6 103 aaKnown RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 SAMD8Q96LT4 415 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF681Q96N22 645 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 CNN2Q99439 309 aaKnown RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 TEAD3Q99594 435 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 RSPO3Q9BXY4 272 aaPredicted RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF350Q9GZX5 532 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 CHRNA10Q9GZZ6 450 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms