RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 MAGEA13PA6NCF6 341 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 OR4C45A6NMZ5 311 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 E7EQL1 145 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 E9PI62 339 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 HS3ST1O14792 307 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 MAGEB4O15481 346 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 SPRY2O43597 315 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 PLPP2O43688 288 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 MTRF1O75570 445 aaKnown RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 RPP14O95059 124 aaKnown RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 PNPP00491 289 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 NGFP01138 241 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 IGLV3-1P01715 115 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 IGHV3-13P01766 116 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 TTRP02766 147 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 LCKP06239 509 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 BTF3P20290 206 aaKnown RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 KITLGP21583 273 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 PCMT1P22061 227 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 PSMA1P25786 263 aaKnown RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 GCH1P30793 250 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 THBS4P35443 961 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 SERPINF1P36955 418 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 KLF3P57682 345 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 EMX1Q04741 257 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 MFGE8Q08431 387 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 SPOCK1Q08629 439 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 MLLT11Q13015 90 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 TPBGQ13641 420 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 ALKBH1Q13686 389 aaKnown RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 GK2Q14410 553 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 CDK5R1Q15078 307 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 MED22Q15528 200 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 TRAM1Q15629 374 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 ADIPOQQ15848 244 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 TIGD6Q17RP2 521 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 SNAI3Q3KNW1 292 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 ZNF718Q3SXZ3 478 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 GLYATL3Q5SZD4 288 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 OR2G6Q5TZ20 316 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 TMEM244Q5VVB8 128 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 DMKNQ6E0U4 476 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 FAM57BQ71RH2 274 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 PGAP1Q75T13 922 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 MRPL21Q7Z2W9 205 aaKnown RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 NAA40Q86UY6 237 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 KLBQ86Z14 1044 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 PRSS35Q8N3Z0 413 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 ZNF611Q8N823 705 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 KBTBD8Q8NFY9 601 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 OR8B12Q8NGG6 310 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 OR1J1Q8NGS3 322 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 OR5AK2Q8NH90 309 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 LILRB1Q8NHL6 650 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 SYNPRQ8TBG9 265 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 KLF14Q8TD94 323 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 MRPL24Q96A35 216 aaKnown RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 SGK3Q96BR1 496 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 C10orf35Q96D05 121 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 HAVCR1Q96D42 359 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 SMIM19Q96E16 107 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 MGLLQ99685 303 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 TTTY10Q9BZA0 68 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 COMMD4Q9H0A8 199 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 CYSLTR2Q9NS75 346 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 CISD1Q9NZ45 108 aaKnown RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 ITGB1BP2Q9UKP3 347 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 SLC22A13Q9Y226 551 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 STARD10Q9Y365 291 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 NOP16Q9Y3C1 178 aaKnown RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 CMAHPQ9Y471 501 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 PTPN13Q12923 2485 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 CELSR2Q9HCU4 2923 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 A0A1B0GTI1 187 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 hCG_38984A0A1B0GV85 526 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 A0A1B0GVI7 797 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 LOC107986453A0A1B0GWG9 222 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 PLSCR5A0PG75 271 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 B9A039 149 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 DHRS3O75911 302 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 SERPINA3P01011 423 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 OR4A8P0C604 315 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 SLC2A1P11166 492 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 ACHEP22303 614 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 GALP22466 123 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 TTKP33981 857 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 PSMB10P40306 273 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 KIR3DL2P43630 455 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 MAP2K4P45985 399 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 FABP6P51161 128 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 CDH15P55291 814 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 ZNF92Q03936 586 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 OR8B8Q15620 311 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 YIF1BQ5BJH7 314 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 WDR38Q5JTN6 314 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 SYT6Q5T7P8 510 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-213ENST00000550629 AGAP6Q5VW22 663 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 XAF1Q6GPH4 301 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 FBXL14Q8N1E6 418 aa4.88□□□□□ -1.63
SCAF11-213ENST00000550629 MS4A15Q8N5U1 240 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms