RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 SEH1LQ96EE3 360 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 PROCRQ9UNN8 238 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 NAP1L6A6NFF2 107 aa18.22■□□□□ 0.51
PTPRF-207ENST00000436724 FIGNL2A6NMB9 653 aa18.22■□□□□ 0.51
PTPRF-207ENST00000436724 WDR1O75083 606 aa18.22■□□□□ 0.51
PTPRF-207ENST00000436724 ZNF782Q6ZMW2 699 aaPredicted RBP18.22■□□□□ 0.51
PTPRF-207ENST00000436724 RFPL4BQ6ZWI9 263 aa18.22■□□□□ 0.51
PTPRF-207ENST00000436724 MRPL21Q7Z2W9 205 aaKnown RBP18.22■□□□□ 0.51
PTPRF-207ENST00000436724 CXorf67Q86X51 503 aaPredicted RBP18.22■□□□□ 0.51
PTPRF-207ENST00000436724 KCNG3Q8TAE7 436 aa18.22■□□□□ 0.51
PTPRF-207ENST00000436724 SPSB1Q96BD6 273 aa18.22■□□□□ 0.51
PTPRF-207ENST00000436724 TMEM59Q9BXS4 323 aa18.22■□□□□ 0.51
PTPRF-207ENST00000436724 ELL3Q9HB65 397 aaPredicted RBP18.22■□□□□ 0.51
PTPRF-207ENST00000436724 DLL4Q9NR61 685 aa18.22■□□□□ 0.51
PTPRF-207ENST00000436724 ZGRF1Q86YA3 2104 aa18.22■□□□□ 0.51
PTPRF-207ENST00000436724 ZNF816-ZNF321PA0A0X1KG74 233 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 ZNF850A8MQ14 1090 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 SPRY1O43609 319 aaPredicted RBP18.21■□□□□ 0.51
PTPRF-207ENST00000436724 ANGPTL7O43827 346 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 TSC22D2O75157 780 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 AGFG2O95081 481 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 TDGF1P3P51864 188 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 MALLQ13021 153 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 CNN3Q15417 329 aaKnown RBP18.21■□□□□ 0.51
PTPRF-207ENST00000436724 PRR30Q53SZ7 412 aaPredicted RBP18.21■□□□□ 0.51
PTPRF-207ENST00000436724 C1orf185Q5T7R7 199 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 SEZ6L2Q6UXD5 910 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 MOB3CQ70IA8 216 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 OR2W3Q7Z3T1 314 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 GPX8Q8TED1 209 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 DACT3Q96B18 629 aaPredicted RBP18.21■□□□□ 0.51
PTPRF-207ENST00000436724 OR10A4Q9H209 315 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 ZNF629Q9UEG4 869 aaPredicted RBP18.21■□□□□ 0.51
PTPRF-207ENST00000436724 GPR160Q9UJ42 338 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 A0A0A6YYH2 397 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 A6NJ64 397 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 SSNA1O43805 119 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 GNB3P16520 340 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 SERPINA2P20848 420 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 SPATA46Q5T0L3 261 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 PLCXD3Q63HM9 321 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 Q6ZTK2 550 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 BHLHE23Q8NDY6 225 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 FAM57AQ8TBR7 257 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 BORCS8Q96FH0 119 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 SELENOIQ9C0D9 397 aa18.21■□□□□ 0.51
PTPRF-207ENST00000436724 SOCS1O15524 211 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 AP3S2P59780 193 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 ZNF260Q3ZCT1 412 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 OLFML2AQ68BL7 652 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 RAB12Q6IQ22 244 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 PAPOLGQ9BWT3 736 aaKnown RBP18.2■□□□□ 0.5
PTPRF-207ENST00000436724 KCNN3Q9UGI6 736 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 NPTNQ9Y639 398 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 IL2RAP01589 272 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 TMEM225BP0DP42 221 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 ALDH3B1P43353 468 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 RBP2P50120 134 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 TBC1D28Q2M2D7 210 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 CDNFQ49AH0 187 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 CDH24Q86UP0 819 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 WDR31Q8NA23 367 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 OR8H1Q8NGG4 311 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 OR4D10Q8NGI6 311 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 OR10R2Q8NGX6 335 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 AQP3Q92482 292 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 S100A13Q99584 98 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 HEXA-AS1Q9H8Q6 139 aa18.2■□□□□ 0.5
PTPRF-207ENST00000436724 UBBP0CG47 229 aa18.19■□□□□ 0.5
PTPRF-207ENST00000436724 PRKACBP22694 351 aa18.19■□□□□ 0.5
PTPRF-207ENST00000436724 LGALSLQ3ZCW2 172 aaPredicted RBP18.19■□□□□ 0.5
PTPRF-207ENST00000436724 OR8S1Q8NH09 359 aa18.19■□□□□ 0.5
PTPRF-207ENST00000436724 DVL3Q92997 716 aaPredicted RBP18.19■□□□□ 0.5
PTPRF-207ENST00000436724 WBP1Q96G27 269 aa18.19■□□□□ 0.5
PTPRF-207ENST00000436724 LILRA1O75019 489 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 LPLP06858 475 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 MGMTP16455 207 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 IL32P24001 234 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 LINC00303Q3SY05 128 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 PLAC9Q5JTB6 97 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 ZBTB37Q5TC79 503 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 NUDCD2Q8WVJ2 157 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 SNRNP40Q96DI7 357 aaKnown RBP18.18■□□□□ 0.5
PTPRF-207ENST00000436724 CCDC120Q96HB5 630 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 CST11Q9H112 138 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 NPDC1Q9NQX5 325 aaPredicted RBP18.18■□□□□ 0.5
PTPRF-207ENST00000436724 G3V3Q6 166 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 ARPC1BO15143 372 aaKnown RBP18.18■□□□□ 0.5
PTPRF-207ENST00000436724 PRAF2O60831 178 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 RAD52P43351 418 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 TMEM50BP56557 158 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 NLRC3Q7RTR2 1065 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 CCDC36Q8IYA8 594 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 ZNF436Q9C0F3 470 aaPredicted RBP18.18■□□□□ 0.5
PTPRF-207ENST00000436724 SCP2D1Q9UJQ7 156 aa18.18■□□□□ 0.5
PTPRF-207ENST00000436724 GTF2F2P13984 249 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 DNASE1P24855 282 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 HOXC12P31275 282 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 PTGER4P35408 488 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 RPS27AP62979 156 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 253.1 ms