RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 SLC16A12Q6ZSM3 486 aa16.55■□□□□ 0.24
USP25-204ENST00000400183 NDUFB6O95139 128 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 HIST1H1DP16402 221 aaKnown RBP16.54■□□□□ 0.24
USP25-204ENST00000400183 PCBP3P57721 371 aaKnown RBP16.54■□□□□ 0.24
USP25-204ENST00000400183 DGAT2L6Q6ZPD8 337 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 PRRX2Q99811 253 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 RPP25Q9BUL9 199 aaKnown RBP16.54■□□□□ 0.24
USP25-204ENST00000400183 PLA2G2FQ9BZM2 168 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 UBE2L5PA0A1B0GUS4 154 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 ACSM4P0C7M7 580 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 TMEM56Q96MV1 263 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 MYOZ1Q9NP98 299 aaPredicted RBP16.54■□□□□ 0.24
USP25-204ENST00000400183 TAAR3PQ9P1P4 343 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 MEOX1P50221 254 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 PRSS41Q7RTY9 318 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.54■□□□□ 0.24
USP25-204ENST00000400183 OR13G1Q8NGZ3 307 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 TMED3Q9Y3Q3 217 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 ZP3P21754 424 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 MPGP29372 298 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 MLF1P58340 268 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 FAM219BQ5XKK7 198 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 CXorf67Q86X51 503 aaPredicted RBP16.54■□□□□ 0.24
USP25-204ENST00000400183 ALG14Q96F25 216 aa16.54■□□□□ 0.24
USP25-204ENST00000400183 FAM103A1Q9BTL3 118 aaKnown RBP16.54■□□□□ 0.24
USP25-204ENST00000400183 HRASP01112 189 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 ARHGAP5-AS1Q96IT6 56 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 RAB18Q9NP72 206 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 TTC3P53804 2025 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 PTGFRP43088 359 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 FZD5Q13467 585 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 BHLHA9Q7RTU4 235 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 ZNF320A2RRD8 509 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 POU2F2P09086 479 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 OR10V1Q8NGI7 309 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 TMEM18Q96B42 140 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 AKR1E2Q96JD6 320 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 H3BMH7 237 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 PGA3P0DJD8 388 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 ZNF32P17041 273 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 SSPNQ14714 243 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 TMEM215Q68D42 235 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 LIMS2Q7Z4I7 341 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 LRRTM1Q86UE6 522 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 ZDHHC11Q9H8X9 412 aa16.53■□□□□ 0.24
USP25-204ENST00000400183 HMGA2P52926 109 aa16.52■□□□□ 0.24
USP25-204ENST00000400183 SP6Q3SY56 376 aa16.52■□□□□ 0.24
USP25-204ENST00000400183 MCHR2Q969V1 340 aa16.52■□□□□ 0.24
USP25-204ENST00000400183 LY86O95711 162 aa16.52■□□□□ 0.24
USP25-204ENST00000400183 TSPAN32Q96QS1 320 aa16.52■□□□□ 0.24
USP25-204ENST00000400183 TMPRSS5Q9H3S3 457 aa16.52■□□□□ 0.24
USP25-204ENST00000400183 C12orf10Q9HB07 376 aa16.52■□□□□ 0.24
USP25-204ENST00000400183 RHOFQ9HBH0 211 aa16.52■□□□□ 0.24
USP25-204ENST00000400183 DDX60LQ5H9U9 1706 aaKnown RBP16.52■□□□□ 0.23
USP25-204ENST00000400183 ZNF83P51522 516 aa16.52■□□□□ 0.23
USP25-204ENST00000400183 SCAND1P57086 179 aa16.52■□□□□ 0.23
USP25-204ENST00000400183 PABPC1L2AQ5JQF8 200 aa16.52■□□□□ 0.23
USP25-204ENST00000400183 ZNF774Q6NX45 483 aa16.52■□□□□ 0.23
USP25-204ENST00000400183 UQCC1Q9NVA1 299 aa16.52■□□□□ 0.23
USP25-204ENST00000400183 MTFP1Q9UDX5 166 aa16.52■□□□□ 0.23
USP25-204ENST00000400183 AKAP11Q9UKA4 1901 aa16.52■□□□□ 0.23
USP25-204ENST00000400183 EPHA8P29322 1005 aaPredicted RBP16.52■□□□□ 0.23
USP25-204ENST00000400183 IGFBP7Q16270 282 aa16.52■□□□□ 0.23
USP25-204ENST00000400183 C4orf17Q53FE4 359 aa16.52■□□□□ 0.23
USP25-204ENST00000400183 CD300LDQ6UXZ3 194 aa16.52■□□□□ 0.23
USP25-204ENST00000400183 COMMD1Q8N668 190 aa16.52■□□□□ 0.23
USP25-204ENST00000400183 CA6P23280 308 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 CLEC12BQ2HXU8 276 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 RNF212Q495C1 297 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 ZNF707Q96C28 371 aaPredicted RBP16.51■□□□□ 0.23
USP25-204ENST00000400183 ZG16BQ96DA0 208 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 EXOGQ9Y2C4 368 aaKnown RBP16.51■□□□□ 0.23
USP25-204ENST00000400183 YTHDF2Q9Y5A9 579 aaKnown RBP16.51■□□□□ 0.23
USP25-204ENST00000400183 SH2D7A6NKC9 451 aaPredicted RBP16.51■□□□□ 0.23
USP25-204ENST00000400183 KCNJ3P48549 501 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 NXPH1P58417 271 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 VN1R4Q7Z5H5 301 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 OR10D3Q8NH80 312 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 PLPPR2Q96GM1 343 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 KNTC1P50748 2209 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 TMEM272A0A1B0GTI8 110 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 NCBP2LA6PVI3 153 aaKnown RBP16.51■□□□□ 0.23
USP25-204ENST00000400183 CEACAM6P40199 344 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 ZNF141Q15928 474 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 ZNF683Q8IZ20 524 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 ZNF561Q8N587 486 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 LRFN3Q9BTN0 628 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 ERRFI1Q9UJM3 462 aaPredicted RBP16.51■□□□□ 0.23
USP25-204ENST00000400183 GOLT1BQ9Y3E0 138 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 IGHV1OR15-9A0A0B4J2B8 117 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 SRD5A2P31213 254 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 LIMK1P53667 647 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 PDCD1Q15116 288 aa16.51■□□□□ 0.23
USP25-204ENST00000400183 MYO5AQ9Y4I1 1855 aaKnown RBP16.5■□□□□ 0.23
USP25-204ENST00000400183 CRYBB2P43320 205 aa16.5■□□□□ 0.23
USP25-204ENST00000400183 JMJD6Q6NYC1 403 aaPredicted RBP16.5■□□□□ 0.23
USP25-204ENST00000400183 TRAT1Q6PIZ9 186 aa16.5■□□□□ 0.23
USP25-204ENST00000400183 TMEM92Q6UXU6 159 aa16.5■□□□□ 0.23
USP25-204ENST00000400183 SLC24A4Q8NFF2 622 aa16.5■□□□□ 0.23
USP25-204ENST00000400183 OR4D9Q8NGE8 314 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms