RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 HAGHLQ6PII5 290 aaPredicted RBP16.03■□□□□ 0.16
SYNE4-202ENST00000340477 FAM90A1Q86YD7 464 aa16.03■□□□□ 0.16
SYNE4-202ENST00000340477 PP6455Q8WZ26 134 aa16.03■□□□□ 0.16
SYNE4-202ENST00000340477 OR51I2Q9H344 312 aa16.03■□□□□ 0.16
SYNE4-202ENST00000340477 C7orf69Q9H7B7 122 aa16.03■□□□□ 0.16
SYNE4-202ENST00000340477 FRRS1LQ9P0K9 344 aa16.03■□□□□ 0.16
SYNE4-202ENST00000340477 HHLA2Q9UM44 414 aa16.03■□□□□ 0.16
SYNE4-202ENST00000340477 POLDIP2Q9Y2S7 368 aa16.03■□□□□ 0.16
SYNE4-202ENST00000340477 EXOSC1Q9Y3B2 195 aaKnown RBP16.03■□□□□ 0.16
SYNE4-202ENST00000340477 ANK3Q12955 4377 aaKnown RBP16.03■□□□□ 0.16
SYNE4-202ENST00000340477 EFCAB10A6NFE3 127 aa16.02■□□□□ 0.16
SYNE4-202ENST00000340477 A6NIN4 97 aa16.02■□□□□ 0.16
SYNE4-202ENST00000340477 OCM2P0CE71 109 aa16.02■□□□□ 0.16
SYNE4-202ENST00000340477 OCMP0CE72 109 aaPredicted RBP16.02■□□□□ 0.16
SYNE4-202ENST00000340477 GLRA1P23415 457 aa16.02■□□□□ 0.16
SYNE4-202ENST00000340477 GMFBP60983 142 aa16.02■□□□□ 0.16
SYNE4-202ENST00000340477 CD276Q5ZPR3 534 aa16.02■□□□□ 0.16
SYNE4-202ENST00000340477 LYPD2Q6UXB3 125 aa16.02■□□□□ 0.16
SYNE4-202ENST00000340477 SLC36A1Q7Z2H8 476 aa16.02■□□□□ 0.16
SYNE4-202ENST00000340477 TMEM80Q96HE8 168 aa16.02■□□□□ 0.16
SYNE4-202ENST00000340477 CHST5Q9GZS9 411 aa16.02■□□□□ 0.16
SYNE4-202ENST00000340477 CAB39Q9Y376 341 aaPredicted RBP16.02■□□□□ 0.16
SYNE4-202ENST00000340477 TMEM212A6NML5 194 aa16.01■□□□□ 0.15
SYNE4-202ENST00000340477 KIAA1324LA8MWY0 1029 aaPredicted RBP16.01■□□□□ 0.15
SYNE4-202ENST00000340477 H0YJX3 145 aa16.01■□□□□ 0.15
SYNE4-202ENST00000340477 J3QT63 122 aa16.01■□□□□ 0.15
SYNE4-202ENST00000340477 TMPRSS2O15393 492 aa16.01■□□□□ 0.15
SYNE4-202ENST00000340477 AKR7A2O43488 359 aa16.01■□□□□ 0.15
SYNE4-202ENST00000340477 GNAO1P09471 354 aa16.01■□□□□ 0.15
SYNE4-202ENST00000340477 HAAOP46952 286 aa16.01■□□□□ 0.15
SYNE4-202ENST00000340477 NANOS3P60323 173 aaKnown RBP16.01■□□□□ 0.15
SYNE4-202ENST00000340477 HOXA4Q00056 320 aaPredicted RBP16.01■□□□□ 0.15
SYNE4-202ENST00000340477 WDR25Q64LD2 544 aaPredicted RBP16.01■□□□□ 0.15
SYNE4-202ENST00000340477 RDH10Q8IZV5 341 aa16.01■□□□□ 0.15
SYNE4-202ENST00000340477 OR13C3Q8NGS6 347 aa16.01■□□□□ 0.15
SYNE4-202ENST00000340477 FGF23Q9GZV9 251 aaPredicted RBP16.01■□□□□ 0.15
SYNE4-202ENST00000340477 ISG20L2Q9H9L3 353 aaKnown RBP16.01■□□□□ 0.15
SYNE4-202ENST00000340477 NEK6Q9HC98 313 aa16.01■□□□□ 0.15
SYNE4-202ENST00000340477 DIMT1Q9UNQ2 313 aaKnown RBP16.01■□□□□ 0.15
SYNE4-202ENST00000340477 FAM230AA0A1W2PPH8 454 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 PQLC2LA1A4F0 135 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 LIMS3P0CW19 117 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 LIMS4P0CW20 117 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 TGM4P49221 684 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 SMIM21Q3B7S5 101 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 DMRTC1Q5HYR2 192 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 OR5AK2Q8NH90 309 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 NANPQ8TBE9 248 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 TRMT10AQ8TBZ6 339 aaKnown RBP16■□□□□ 0.15
SYNE4-202ENST00000340477 AQP3Q92482 292 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 TFAP2CQ92754 450 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 TMIGD2Q96BF3 282 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 BORCS8Q96FH0 119 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 TMPRSS13Q9BYE2 586 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 DNTTIP1Q9H147 329 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 CNOT2Q9NZN8 540 aaKnown RBP16■□□□□ 0.15
SYNE4-202ENST00000340477 KAAG1Q9UBP8 84 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 METRNQ9UJH8 293 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 INSIG2Q9Y5U4 225 aa16■□□□□ 0.15
SYNE4-202ENST00000340477 ARHGAP32A7KAX9 2087 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 LOC105371242A0A075B767 164 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 IGHV2-70DA0A0C4DH43 119 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 OR4C45A6NMZ5 311 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 ENSAO43768 121 aaKnown RBP15.99■□□□□ 0.15
SYNE4-202ENST00000340477 PIPP12273 146 aaPredicted RBP15.99■□□□□ 0.15
SYNE4-202ENST00000340477 HSPA13P48723 471 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 ETV1P50549 477 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 FUT6P51993 359 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 AQP4P55087 323 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 ARMCX4Q5H9R4 360 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 C1QL2Q7Z5L3 287 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 PRIMA1Q86XR5 153 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 STX19Q8N4C7 294 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 NPRL2Q8WTW4 380 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 TSEN15Q8WW01 171 aaKnown RBP15.99■□□□□ 0.15
SYNE4-202ENST00000340477 RAB40AQ8WXH6 277 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 MMP26Q9NRE1 261 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 RASL12Q9NYN1 266 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 NLKQ9UBE8 527 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 CTSZQ9UBR2 303 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 AUP1Q9Y679 476 aa15.99■□□□□ 0.15
SYNE4-202ENST00000340477 TRBV2A0A0J9YWF9 115 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 TRAPPC2LH3BP13 241 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.98■□□□□ 0.15
SYNE4-202ENST00000340477 NDUFB3O43676 98 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 RHBDL1O75783 438 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 PRKACBP22694 351 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 ST3GAL4Q11206 333 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 C11orf91Q3C1V1 193 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 CCDC58Q4VC31 144 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 LRRC10Q5BKY1 277 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 RPL22L1Q6P5R6 122 aaKnown RBP15.98■□□□□ 0.15
SYNE4-202ENST00000340477 UTS2BQ765I0 119 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 POC1AQ8NBT0 407 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 BPIFB6Q8NFQ5 453 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 NRG4Q8WWG1 115 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 ST8SIA4Q92187 359 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 RNF166Q96A37 237 aaPredicted RBP15.98■□□□□ 0.15
SYNE4-202ENST00000340477 FGGYQ96C11 551 aa15.98■□□□□ 0.15
SYNE4-202ENST00000340477 CCL13Q99616 98 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms