RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 RAB3AP20336 220 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 CDKN1AP38936 164 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 PPP3R1P63098 170 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 CNN3Q15417 329 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 TESK1Q15569 626 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 PCGF3Q3KNV8 242 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 CEP78Q5JTW2 689 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 C22orf42Q6IC83 251 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 OR1M1Q8NGA1 313 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 OR5A2Q8NGI9 324 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 OR8S1Q8NH09 359 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 RPL3LQ92901 407 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 DVL3Q92997 716 aaPredicted RBP16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 SPSB1Q96BD6 273 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 PERPQ96FX8 193 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 MICU1Q9BPX6 476 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 CACNG6Q9BXT2 260 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 CXXC4Q9H2H0 198 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 GSTK1Q9Y2Q3 226 aa16.84■□□□□ 0.29
PDLIM2-221ENST00000622702 LOC100506127A0A0U1RQW1 187 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 OR5B21A6NL26 309 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 GABARAPO95166 117 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 SRMP19623 302 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 PRKACBP22694 351 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 TNFSF4P23510 183 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 CD200P41217 278 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 MZT1Q08AG7 82 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 GPR107Q5VW38 600 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 SLC16A12Q6ZSM3 486 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 ZCCHC24Q8N2G6 241 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 CELF2-AS1Q8N7Q2 184 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 DNAAF1Q8NEP3 725 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 OR51A2Q8NGJ7 313 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 RTL8AQ9BWD3 113 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 FGF23Q9GZV9 251 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 ZNF701Q9NV72 531 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 SLC7A11Q9UPY5 501 aa16.83■□□□□ 0.28
PDLIM2-221ENST00000622702 TRAV1-2A0A0B4J238 106 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 F5H5P2 479 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 PTBP3O95758 552 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 AZGP1P25311 298 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 CALRP27797 417 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 PTH2RP49190 550 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 GNG3P63215 75 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 MAB21L1Q13394 359 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 FAM76BQ5HYJ3 339 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 DMRTC1Q5HYR2 192 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 LRRC75A-AS1Q8N1F1 130 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 RNF170Q96K19 258 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 CENPOQ9BU64 300 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 GSX2Q9BZM3 304 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 NEK6Q9HC98 313 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 TCF7L1Q9HCS4 588 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 TMEM138Q9NPI0 162 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 SNTG1Q9NSN8 517 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 C14orf119Q9NWQ9 140 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 IL19Q9UHD0 177 aa16.82■□□□□ 0.28
PDLIM2-221ENST00000622702 PRRC2AP48634 2157 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-221ENST00000622702 PQLC2LA1A4F0 135 aa16.81■□□□□ 0.28
PDLIM2-221ENST00000622702 ALDOBP05062 364 aa16.81■□□□□ 0.28
PDLIM2-221ENST00000622702 FUT6P51993 359 aa16.81■□□□□ 0.28
PDLIM2-221ENST00000622702 TNFAIP6P98066 277 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-221ENST00000622702 KCTD7Q96MP8 289 aa16.81■□□□□ 0.28
PDLIM2-221ENST00000622702 VRK1Q99986 396 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-221ENST00000622702 NAA50Q9GZZ1 169 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-221ENST00000622702 RAB1BQ9H0U4 201 aa16.81■□□□□ 0.28
PDLIM2-221ENST00000622702 SLITRK2Q9H156 845 aa16.81■□□□□ 0.28
PDLIM2-221ENST00000622702 TPK1Q9H3S4 243 aa16.81■□□□□ 0.28
PDLIM2-221ENST00000622702 ITPR3Q14573 2671 aa16.81■□□□□ 0.28
PDLIM2-221ENST00000622702 ARID1AO14497 2285 aa16.81■□□□□ 0.28
PDLIM2-221ENST00000622702 LOC100289279A0A1B0GTE1 492 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 MEGF11A6BM72 1044 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 TMEM210A6NLX4 147 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 ERCC1P07992 297 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 OCMP0CE72 109 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 PAX1P15863 534 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 BDKRB2P30411 391 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 THBS2P35442 1172 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 SRP9P49458 86 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 CTF1Q16619 201 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 LRRTM1Q86UE6 522 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 CLVS1Q8IUQ0 354 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 NPRL2Q8WTW4 380 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 MEGF10Q96KG7 1140 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 OR2V2Q96R30 315 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 SHISA3A0PJX4 238 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 ZNF732B4DXR9 585 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 MYL9P24844 172 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 GATA4P43694 442 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 RBP2P50120 134 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 GPM6AP51674 278 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 ATP5J2P56134 94 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 CCL8P80075 99 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 LHFPL2Q6ZUX7 228 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 WDR86Q86TI4 376 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 NKAIN3Q8N8D7 197 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 TRMT10AQ8TBZ6 339 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 ITLN1Q8WWA0 313 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 NEU4Q8WWR8 484 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 BORCS8Q96FH0 119 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms