RNA–Protein interactions for RNA: ENST00000584960.1

RIOK3-210, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-210ENST00000584960 TRAM1Q15629 374 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 SPRNQ5BIV9 151 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 ZNF773Q6PK81 442 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 ZNF367Q7RTV3 350 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 MOGAT3Q86VF5 341 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 ZNF573Q86YE8 665 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 SPARTQ8N0X7 666 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 DNAAF1Q8NEP3 725 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 OR51A4Q8NGJ6 313 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 OR10AC1Q8NH08 325 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 HPSE2Q8WWQ2 592 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 UFD1Q92890 307 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 SPSB1Q96BD6 273 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 ADAT3Q96EY9 351 aaPredicted RBP12.49□□□□□ -0.41
RIOK3-210ENST00000584960 MGLLQ99685 303 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 ZCCHC4Q9H5U6 513 aa12.49□□□□□ -0.41
RIOK3-210ENST00000584960 IGHV4-30-2A0A087WSY4 118 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 TRBV5-5A0A0J9YX44 114 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 LRP5LA4QPB2 252 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 ZNF732B4DXR9 585 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 TMEM178BH3BS89 294 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 PPIHO43447 177 aaKnown RBP12.48□□□□□ -0.41
RIOK3-210ENST00000584960 CPEP16870 476 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 ATF1P18846 271 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 PSMA1P25786 263 aaKnown RBP12.48□□□□□ -0.41
RIOK3-210ENST00000584960 ZNF154Q13106 437 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 Q499Y3 187 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 CEP78Q5JTW2 689 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 KCTD8Q6ZWB6 473 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 ZFP41Q8N8Y5 198 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 OR10Z1Q8NGY1 313 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 ZNF671Q8TAW3 534 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 NR1H4Q96RI1 486 aaPredicted RBP12.48□□□□□ -0.41
RIOK3-210ENST00000584960 REG4Q9BYZ8 158 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 OR51I2Q9H344 312 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 PPP1R3EQ9H7J1 279 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 GPR173Q9NS66 373 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 C1orf123Q9NWV4 160 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 RNF7Q9UBF6 113 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 NPTNQ9Y639 398 aa12.48□□□□□ -0.41
RIOK3-210ENST00000584960 TEX15Q9BXT5 2789 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 A0A087WXM4 84 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 PQLC2LA1A4F0 135 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 A6NIN4 97 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 A6NLC8 198 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 H3BSH0 61 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 LMX1BO60663 402 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 OCMP0CE72 109 aaPredicted RBP12.47□□□□□ -0.41
RIOK3-210ENST00000584960 HSMCR30P0CW71 290 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 FOSL1P15407 271 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 CPT2P23786 658 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 MAPK3P27361 379 aaPredicted RBP12.47□□□□□ -0.41
RIOK3-210ENST00000584960 THBS2P35442 1172 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 PMELP40967 661 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 MAP2K4P45985 399 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 RBP2P50120 134 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 GPM6AP51674 278 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 RPS11P62280 158 aaKnown RBP eCLIP12.47□□□□□ -0.41
RIOK3-210ENST00000584960 LOXL1Q08397 574 aaPredicted RBP12.47□□□□□ -0.41
RIOK3-210ENST00000584960 MPPED2Q15777 294 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 UBE2V2Q15819 145 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 UBE2UQ5VVX9 321 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 PRAMEF6Q5VXH4 476 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 ZNF420Q8TAQ5 688 aaPredicted RBP12.47□□□□□ -0.41
RIOK3-210ENST00000584960 RGP1Q92546 391 aaPredicted RBP12.47□□□□□ -0.41
RIOK3-210ENST00000584960 DVL3Q92997 716 aaPredicted RBP12.47□□□□□ -0.41
RIOK3-210ENST00000584960 TMEM106AQ96A25 262 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 BORCS8Q96FH0 119 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 BPESC1Q9GZL8 116 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 UFSP2Q9NUQ7 469 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 CACNG2Q9Y698 323 aa12.47□□□□□ -0.41
RIOK3-210ENST00000584960 YLPM1P49750 1951 aaKnown RBP12.47□□□□□ -0.41
RIOK3-210ENST00000584960 GPX5O75715 221 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 LHBP01229 141 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 HEXAP06865 529 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 ACAA1P09110 424 aaPredicted RBP12.46□□□□□ -0.41
RIOK3-210ENST00000584960 RAB3AP20336 220 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 PCMT1P22061 227 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 USF1P22415 310 aaPredicted RBP12.46□□□□□ -0.41
RIOK3-210ENST00000584960 ATP1B3P54709 279 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 TMEM155Q4W5P6 130 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 LHFPL2Q6ZUX7 228 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 WDR86Q86TI4 376 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 C11orf53Q8IXP5 236 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 MUC20Q8N307 709 aaPredicted RBP12.46□□□□□ -0.41
RIOK3-210ENST00000584960 SCCPDHQ8NBX0 429 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 PHYHIPQ92561 330 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 CPNE2Q96FN4 548 aaPredicted RBP12.46□□□□□ -0.41
RIOK3-210ENST00000584960 ZNF696Q9H7X3 374 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 TREM2Q9NZC2 230 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 CKLFQ9UBR5 152 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 POLDIP2Q9Y2S7 368 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 WIPI2Q9Y4P8 454 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 ITPR3Q14573 2671 aa12.46□□□□□ -0.41
RIOK3-210ENST00000584960 PPIAL4EA0A075B759 164 aa12.45□□□□□ -0.42
RIOK3-210ENST00000584960 PNMA8CA0A1B0GUJ8 204 aa12.45□□□□□ -0.42
RIOK3-210ENST00000584960 hCG_1807616A0A1W2PRN6 198 aa12.45□□□□□ -0.42
RIOK3-210ENST00000584960 TRIM64BA6NI03 449 aa12.45□□□□□ -0.42
RIOK3-210ENST00000584960 ZNF879B4DU55 563 aa12.45□□□□□ -0.42
RIOK3-210ENST00000584960 PPIAL4DF5H284 164 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms