RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 UTP4Q969X6 686 aaKnown RBP13.09□□□□□ -0.31
CRLF3-203ENST00000578692 MED30Q96HR3 178 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 RAB3IPQ96QF0 476 aaPredicted RBP13.09□□□□□ -0.31
CRLF3-203ENST00000578692 CADM1Q9BY67 442 aaKnown RBP13.09□□□□□ -0.31
CRLF3-203ENST00000578692 CHIAQ9BZP6 476 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 SLITRK2Q9H156 845 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 ZNF696Q9H7X3 374 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 FAM206AQ9NX38 181 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 POMT1Q9Y6A1 747 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 TMEM14AQ9Y6G1 99 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 A0A1B0GVI7 797 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 PRKYO43930 277 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 GPM6AP51674 278 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 ROM1Q03395 351 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 PRR31Q5SQ13 230 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 ZNF788Q6ZQV5 615 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 TBC1D15Q8TC07 691 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 SSMEM1Q8WWF3 244 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 ASB17Q8WXJ9 295 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 OR8B4Q96RC9 309 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 DCTN5Q9BTE1 182 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 PBOV1Q9GZY1 135 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 H2AFY2Q9P0M6 372 aaPredicted RBP13.08□□□□□ -0.31
CRLF3-203ENST00000578692 ONECUT1Q9UBC0 465 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 COPS3Q9UNS2 423 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 MMP24Q9Y5R2 645 aa13.08□□□□□ -0.31
CRLF3-203ENST00000578692 A0A1B0GUS0 222 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 ZNF732B4DXR9 585 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 SELLP14151 372 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 ATP6V1B1P15313 513 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 GLRA1P23415 457 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 RIDAP52758 137 aaKnown RBP13.07□□□□□ -0.32
CRLF3-203ENST00000578692 GNG3P63215 75 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 RIPPLY1Q0D2K3 151 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 CEACAM21Q3KPI0 293 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 CEP78Q5JTW2 689 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 MEPCEQ7L2J0 689 aaKnown RBP13.07□□□□□ -0.32
CRLF3-203ENST00000578692 BCDIN3DQ7Z5W3 292 aaKnown RBP13.07□□□□□ -0.32
CRLF3-203ENST00000578692 THAP5Q7Z6K1 395 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 COMMD2Q86X83 199 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 CMTM4Q8IZR5 234 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 OR5A2Q8NGI9 324 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 ANGPTL6Q8NI99 470 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 OR51E1Q8TCB6 317 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 H1FXQ92522 213 aaKnown RBP13.07□□□□□ -0.32
CRLF3-203ENST00000578692 PPP1R14AQ96A00 147 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 PRRG3Q9BZD7 231 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 OR51I2Q9H344 312 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 BEX1Q9HBH7 125 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 KRT84Q9NSB2 600 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 IKZF2Q9UKS7 526 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 A0A0U1RQK1 487 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 NKX6-3A6NJ46 265 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 OR2AT4A6NND4 320 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 PRR32B1ATL7 298 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 G3V2T6 193 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 MITFO75030 526 aaPredicted RBP13.07□□□□□ -0.32
CRLF3-203ENST00000578692 RHBDL1O75783 438 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 IGLV3-1P01715 115 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 TFF1P04155 84 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 ACAA1P09110 424 aaPredicted RBP13.07□□□□□ -0.32
CRLF3-203ENST00000578692 EFNB1P98172 346 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 BNIP1Q12981 228 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 ZNF829Q3KNS6 432 aaPredicted RBP13.07□□□□□ -0.32
CRLF3-203ENST00000578692 DMRTC1Q5HYR2 192 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 METAP1DQ6UB28 335 aaPredicted RBP13.07□□□□□ -0.32
CRLF3-203ENST00000578692 MOB3CQ70IA8 216 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 KIR3DL3Q8N743 410 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 TCEANCQ8N8B7 351 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 C8orf46Q8TAG6 207 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 ZNF671Q8TAW3 534 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 NPRL2Q8WTW4 380 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 GAFA1Q96PS6 74 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 TTTY10Q9BZA0 68 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 GPR84Q9NQS5 396 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 C1RLQ9NZP8 487 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 NLKQ9UBE8 527 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 SLC25A10Q9UBX3 287 aaPredicted RBP13.07□□□□□ -0.32
CRLF3-203ENST00000578692 NUFIP1Q9UHK0 495 aaKnown RBP13.07□□□□□ -0.32
CRLF3-203ENST00000578692 FAM96BQ9Y3D0 163 aa13.07□□□□□ -0.32
CRLF3-203ENST00000578692 SIGLEC5O15389 551 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 KNG1P01042 644 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 IER3P46695 156 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 GABRA2P47869 451 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 RAG2P55895 527 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 CXCR4P61073 352 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 ACTR3P61158 418 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 RELBQ01201 579 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 ATP6AP1Q15904 470 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 DGUOKQ16854 277 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 ZBTB37Q5TC79 503 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 SLX4IPQ5VYV7 408 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 NXNL2Q5VZ03 156 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 Q8N7P7 452 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 OR4F5Q8NH21 305 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 DYRK2Q92630 601 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 CNN2Q99439 309 aaKnown RBP13.06□□□□□ -0.32
CRLF3-203ENST00000578692 SIRT7Q9NRC8 400 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 PIGLQ9Y2B2 252 aa13.06□□□□□ -0.32
CRLF3-203ENST00000578692 SLC22A31A6NKX4 558 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms