RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 RAP2AP10114 183 aa16.14■□□□□ 0.17
TNFRSF1B-204ENST00000536782 PRB3Q04118 309 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1B-204ENST00000536782 FAM76BQ5HYJ3 339 aa16.14■□□□□ 0.17
TNFRSF1B-204ENST00000536782 PLBD1Q6P4A8 553 aa16.14■□□□□ 0.17
TNFRSF1B-204ENST00000536782 C1orf122Q6ZSJ8 110 aa16.14■□□□□ 0.17
TNFRSF1B-204ENST00000536782 CCDC124Q96CT7 223 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1B-204ENST00000536782 LRGUKQ96M69 825 aa16.14■□□□□ 0.17
TNFRSF1B-204ENST00000536782 GAFA1Q96PS6 74 aa16.14■□□□□ 0.17
TNFRSF1B-204ENST00000536782 SLC25A10Q9UBX3 287 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1B-204ENST00000536782 A0A1W2PRD5 423 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 A0A1W2PRF3 423 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 A0A1W2PRM7 423 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 GYG2O15488 501 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 PAHP00439 452 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 CST1P01037 141 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 POU1F1P28069 291 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 KLRD1Q13241 179 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 DGUOKQ16854 277 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 ZDHHC23Q8IYP9 409 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 PAPD5Q8NDF8 572 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 ANGPTL6Q8NI99 470 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 TNFRSF14Q92956 283 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 CLPTM1LQ96KA5 538 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 LYZL4Q96KX0 146 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 HIST1H2AAQ96QV6 131 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 NIPAL2Q9H841 368 aa16.13■□□□□ 0.17
TNFRSF1B-204ENST00000536782 A0A1W2PQ09 198 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 SLC22A31A6NKX4 558 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 M0R1W7 72 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 PRODHO43272 600 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 TSPAN9O75954 239 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 TFF1P04155 84 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 ACAA1P09110 424 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 HOXB6P17509 224 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 NDUFB7P17568 137 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 TGFBR2P37173 567 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 UBE2E1P51965 193 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 DLX1P56177 255 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 CAV3P56539 151 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 PSMA6P60900 246 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 GINS1Q14691 196 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 NCR3LG1Q68D85 454 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 OR8B12Q8NGG6 310 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 OR5R1Q8NH85 324 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 HPSE2Q8WWQ2 592 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 CHID1Q9BWS9 393 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 FGF23Q9GZV9 251 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 METTL8Q9H825 291 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 NLKQ9UBE8 527 aa16.12■□□□□ 0.17
TNFRSF1B-204ENST00000536782 MEIOCA2RUB1 952 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 AQP12BA6NM10 295 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 OR2AT4A6NND4 320 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 GNGT2O14610 69 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 SIGLEC5O15389 551 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 HMGN1P05114 100 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 GLRA1P23415 457 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 DCTDP32321 178 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 SAA4P35542 130 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 GPM6AP51674 278 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 BLMHQ13867 455 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 AQP12AQ8IXF9 295 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 PNKDQ8N490 385 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 FAM81AQ8TBF8 368 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 SLC7A6OSQ96CW6 309 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 KLHDC2Q9Y2U9 406 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 LRP12Q9Y561 859 aa16.11■□□□□ 0.17
TNFRSF1B-204ENST00000536782 ZNF816-ZNF321PA0A0X1KG74 233 aa16.1■□□□□ 0.17
TNFRSF1B-204ENST00000536782 MAP2K3P46734 347 aa16.1■□□□□ 0.17
TNFRSF1B-204ENST00000536782 GABRA2P47869 451 aa16.1■□□□□ 0.17
TNFRSF1B-204ENST00000536782 RPS7P62081 194 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1B-204ENST00000536782 ACSM1Q08AH1 577 aa16.1■□□□□ 0.17
TNFRSF1B-204ENST00000536782 SLC35D3Q5M8T2 416 aa16.1■□□□□ 0.17
TNFRSF1B-204ENST00000536782 KRT77Q7Z794 578 aa16.1■□□□□ 0.17
TNFRSF1B-204ENST00000536782 CPOQ8IVL8 374 aa16.1■□□□□ 0.17
TNFRSF1B-204ENST00000536782 DUS3LQ96G46 650 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1B-204ENST00000536782 LAMP5Q9UJQ1 280 aa16.1■□□□□ 0.17
TNFRSF1B-204ENST00000536782 ANKRD61A6NGH8 418 aa16.09■□□□□ 0.17
TNFRSF1B-204ENST00000536782 RHBDL1O75783 438 aa16.09■□□□□ 0.17
TNFRSF1B-204ENST00000536782 DNAJC8O75937 253 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1B-204ENST00000536782 OSMP13725 252 aa16.09■□□□□ 0.17
TNFRSF1B-204ENST00000536782 ALOX5APP20292 161 aa16.09■□□□□ 0.17
TNFRSF1B-204ENST00000536782 GNG3P63215 75 aa16.09■□□□□ 0.17
TNFRSF1B-204ENST00000536782 CDK5Q00535 292 aa16.09■□□□□ 0.17
TNFRSF1B-204ENST00000536782 BNIP1Q12981 228 aa16.09■□□□□ 0.17
TNFRSF1B-204ENST00000536782 TMEM179BQ7Z7N9 219 aa16.09■□□□□ 0.17
TNFRSF1B-204ENST00000536782 ADGRG5Q8IZF4 528 aa16.09■□□□□ 0.17
TNFRSF1B-204ENST00000536782 OR51I2Q9H344 312 aa16.09■□□□□ 0.17
TNFRSF1B-204ENST00000536782 ZNF556Q9HAH1 456 aa16.09■□□□□ 0.17
TNFRSF1B-204ENST00000536782 IGKV1D-17A0A075B6S4 117 aa16.08■□□□□ 0.16
TNFRSF1B-204ENST00000536782 ACOD1A6NK06 481 aa16.08■□□□□ 0.16
TNFRSF1B-204ENST00000536782 ZNF732B4DXR9 585 aa16.08■□□□□ 0.16
TNFRSF1B-204ENST00000536782 TSPAN15O95858 294 aa16.08■□□□□ 0.16
TNFRSF1B-204ENST00000536782 EGR3Q06889 387 aa16.08■□□□□ 0.16
TNFRSF1B-204ENST00000536782 CEACAM21Q3KPI0 293 aa16.08■□□□□ 0.16
TNFRSF1B-204ENST00000536782 CEP78Q5JTW2 689 aa16.08■□□□□ 0.16
TNFRSF1B-204ENST00000536782 SLC35E4Q6ICL7 350 aa16.08■□□□□ 0.16
TNFRSF1B-204ENST00000536782 KCTD18Q6PI47 426 aaPredicted RBP16.08■□□□□ 0.16
TNFRSF1B-204ENST00000536782 KRT74Q7RTS7 529 aa16.08■□□□□ 0.16
TNFRSF1B-204ENST00000536782 ZNRF1Q8ND25 227 aa16.08■□□□□ 0.16
TNFRSF1B-204ENST00000536782 BEND2Q8NDZ0 799 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms