RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 C1orf122Q6ZSJ8 110 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 BTN2A1Q7KYR7 527 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 ZDHHC13Q8IUH4 622 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 FTMTQ8N4E7 242 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 BOLLQ8N9W6 283 aaKnown RBP8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 SCCPDHQ8NBX0 429 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 OTULINQ96BN8 352 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 SEH1LQ96EE3 360 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 FAM71F1Q96KD3 344 aaPredicted RBP8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 TECTBQ96PL2 329 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 DUX5Q96PT3 197 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 OR8B4Q96RC9 309 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 CCL13Q99616 98 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 PKP2Q99959 881 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 C9orf16Q9BUW7 83 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 PAPOLGQ9BWT3 736 aaKnown RBP8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 OR51I2Q9H344 312 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 BRD7Q9NPI1 651 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 PAPOLBQ9NRJ5 636 aaKnown RBP8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 HAO2Q9NYQ3 351 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 DNAJC27Q9NZQ0 273 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 KPTNQ9Y664 436 aa8.02□□□□□ -1.13
TMEM39A-210ENST00000490099 IGHV3OR15-7A0A075B7D8 119 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 MDFIC2A0A1B0GVS7 189 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 TMEM269A0A1B0GVZ9 245 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 A0A1B0GW55 424 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 hCG_1807616A0A1W2PRN6 198 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 ANXA2P2A6NMY6 339 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 ZAR1LA6NP61 321 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 ZNF850A8MQ14 1090 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 CASQ2O14958 399 aaPredicted RBP8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 HOXA3O43365 443 aaPredicted RBP8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 PRKYO43930 277 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 DUX4L2P0CJ85 424 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 DUX4L3P0CJ86 424 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 DUX4L4P0CJ87 422 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 DUX4L5P0CJ88 424 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 DUX4L6P0CJ89 424 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 DUX4L7P0CJ90 424 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 GNALP38405 381 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 POU4F2Q12837 409 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 CEACAM21Q3KPI0 293 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 TMEM42Q69YG0 159 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 C12orf73Q69YU5 71 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 KDM4DQ6B0I6 523 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 DUX4L9Q6RFH8 374 aaPredicted RBP8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 ZNF788Q6ZQV5 615 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 SLC36A1Q7Z2H8 476 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 AMIGO2Q86SJ2 522 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 ZNF679Q8IYX0 411 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 FGFRL1Q8N441 504 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 OR5K1Q8NHB7 308 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 ANGPTL6Q8NI99 470 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 ASB17Q8WXJ9 295 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 EME1Q96AY2 570 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 RNF170Q96K19 258 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 PCGF1Q9BSM1 259 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 RTL8AQ9BWD3 113 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 TEX12Q9BXU0 123 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 SLITRK2Q9H156 845 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 WDR13Q9H1Z4 485 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 SEMA6AQ9H2E6 1030 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 ZNF696Q9H7X3 374 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 UNKLQ9H9P5 680 aaKnown RBP8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 ACOXLQ9NUZ1 547 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 TVP23BQ9NYZ1 205 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 DUX4Q9UBX2 424 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 NUFIP1Q9UHK0 495 aaKnown RBP8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 LAMP5Q9UJQ1 280 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 COPS3Q9UNS2 423 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 PCDHGB1Q9Y5G3 927 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 TMEM14AQ9Y6G1 99 aa8.01□□□□□ -1.13
TMEM39A-210ENST00000490099 ZNF816-ZNF321PA0A0X1KG74 233 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 A6NJY4 79 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 G3V2T6 193 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 SPRY1O43609 319 aaPredicted RBP8□□□□□ -1.13
TMEM39A-210ENST00000490099 NDUFA7O95182 113 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 MELTFP08582 738 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 ACAA1P09110 424 aaPredicted RBP8□□□□□ -1.13
TMEM39A-210ENST00000490099 MAP2K3P46734 347 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 RPL15P61313 204 aaKnown RBP8□□□□□ -1.13
TMEM39A-210ENST00000490099 ARF6P62330 175 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 GNG3P63215 75 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 METTL11BQ5VVY1 283 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 MEPCEQ7L2J0 689 aaKnown RBP8□□□□□ -1.13
TMEM39A-210ENST00000490099 KRT77Q7Z794 578 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 LDLRAD3Q86YD5 345 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 KIR3DL3Q8N743 410 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 PACRGLQ8N7B6 248 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 FAM216BQ8N7L0 139 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 Q8N7P7 452 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 OR5A2Q8NGI9 324 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 GATAD2BQ8WXI9 593 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 PIGCQ92535 297 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 RPL3LQ92901 407 aaKnown RBP8□□□□□ -1.13
TMEM39A-210ENST00000490099 TNFRSF14Q92956 283 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 MNTQ99583 582 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 DCTN5Q9BTE1 182 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 MROQ9BYG7 248 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 PBOV1Q9GZY1 135 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms