RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 P2RY6Q15077 328 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 PCGF3Q3KNV8 242 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 ZFP69Q49AA0 526 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 FAHD2BQ6P2I3 314 aaPredicted RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 INO80CQ6PI98 192 aaPredicted RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 COLCA1Q6ZS62 124 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 LYPD6Q86Y78 171 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 SIAH3Q8IW03 269 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 SAXO1Q8IYX7 474 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 TCTE3Q8IZS6 198 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 PXT1Q8NFP0 134 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 FDCSPQ8NFU4 85 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 OR13C9Q8NGT0 318 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 OR10R2Q8NGX6 335 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 OR6K3Q8NGY3 331 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 FNDC9Q8TBE3 224 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 GPX8Q8TED1 209 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 ABHD3Q8WU67 409 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 SLC7A6Q92536 515 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 SLC25A28Q96A46 364 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 FBXO17Q96EF6 278 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 ADAT3Q96EY9 351 aaPredicted RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 BORCS8Q96FH0 119 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 FAHD2AQ96GK7 314 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 WDYHV1Q96HA8 205 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 REEP6Q96HR9 211 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 FAM71F1Q96KD3 344 aaPredicted RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 ALKBH3Q96Q83 286 aaPredicted RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 CNTD2Q9H8S5 307 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 MYOZ1Q9NP98 299 aaPredicted RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 IFT46Q9NQC8 304 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 IL36GQ9NZH8 169 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 CLEC4AQ9UMR7 237 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 PIGLQ9Y2B2 252 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 MPC1Q9Y5U8 109 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 FLNBO75369 2602 aaKnown RBP5.54□□□□□ -1.52
SF3A3-208ENST00000489537 ASH1LQ9NR48 2969 aaKnown RBP5.54□□□□□ -1.52
SF3A3-208ENST00000489537 LINC00854A0A1B0GVQ3 168 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 CIB4A0PJX0 185 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 DVL2O14641 736 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 CREBL2O60519 120 aaPredicted RBP5.54□□□□□ -1.52
SF3A3-208ENST00000489537 NDUFB6O95139 128 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 RAB3DO95716 219 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 NRASP01111 189 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 IFNA6P05013 189 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 MMP7P09237 267 aaPredicted RBP5.54□□□□□ -1.52
SF3A3-208ENST00000489537 CD3GP09693 182 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 GSTT2P0CG29 244 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 ANXA3P12429 323 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 GTF2F2P13984 249 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 FOSL1P15407 271 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 GIFP27352 417 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 AGTR1P30556 359 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 CLDN12P56749 244 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 TAS2R31P59538 309 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 GNG2P59768 71 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 UBE2MP61081 183 aaKnown RBP5.54□□□□□ -1.52
SF3A3-208ENST00000489537 UBE2NP61088 152 aaKnown RBP5.54□□□□□ -1.52
SF3A3-208ENST00000489537 CXADRP78310 365 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 DGCR2P98153 550 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 LY6DQ14210 128 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 OR8B8Q15620 311 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 KISS1Q15726 138 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 NDUFA5Q16718 116 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 GSG1Q2KHT4 349 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 TBC1D28Q2M2D7 210 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 DEFB109BQ30KR1 87 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 RNASE10Q5GAN6 216 aaKnown RBP5.54□□□□□ -1.52
SF3A3-208ENST00000489537 PABPC1L2AQ5JQF8 200 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 TSPO2Q5TGU0 170 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 NSUN5P2Q63ZY6 315 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 TMEM42Q69YG0 159 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 STEAP1BQ6NZ63 245 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 LPCAT3Q6P1A2 487 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 GLIPR1L1Q6UWM5 242 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 PLXDC2Q6UX71 529 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 ZNF782Q6ZMW2 699 aaPredicted RBP5.54□□□□□ -1.52
SF3A3-208ENST00000489537 Q6ZT83 130 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 FAM214BQ7L5A3 538 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 MRPL21Q7Z2W9 205 aaKnown RBP5.54□□□□□ -1.52
SF3A3-208ENST00000489537 LINC00596Q86U02 117 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 NAA40Q86UY6 237 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 LIX1LQ8IVB5 337 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 SKA3Q8IX90 412 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 IZUMO1Q8IYV9 350 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 ARRDC1Q8N5I2 433 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 FAM169BQ8N8A8 192 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 OR52N4Q8NGI2 321 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 OR52I2Q8NH67 350 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 SNAPC3Q92966 411 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 RAB3CQ96E17 227 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 ZNF845Q96IR2 970 aaPredicted RBP5.54□□□□□ -1.52
SF3A3-208ENST00000489537 RADILQ96JH8 1075 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 HYLS1Q96M11 299 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 CHST6Q9GZX3 395 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 WNT5BQ9H1J7 359 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 DEFB127Q9H1M4 99 aa5.54□□□□□ -1.52
SF3A3-208ENST00000489537 CLEC4MQ9H2X3 399 aaPredicted RBP5.54□□□□□ -1.52
SF3A3-208ENST00000489537 SPACA1Q9HBV2 294 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms