RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 MRPL24Q96A35 216 aaKnown RBP7.86□□□□□ -1.15
RTN4-206ENST00000394611 SCGB3A2Q96PL1 93 aa7.86□□□□□ -1.15
RTN4-206ENST00000394611 WNT16Q9UBV4 365 aa7.86□□□□□ -1.15
RTN4-206ENST00000394611 LAMP3Q9UQV4 416 aa7.86□□□□□ -1.15
RTN4-206ENST00000394611 FLVCR1Q9Y5Y0 555 aa7.86□□□□□ -1.15
RTN4-206ENST00000394611 GPR179Q6PRD1 2367 aa7.86□□□□□ -1.15
RTN4-206ENST00000394611 TMED7-TICAM2A0A0A6YYA0 188 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 MEGF11A6BM72 1044 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 RER1O15258 196 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 SSTP61278 116 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 GAB4Q2WGN9 574 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 TMEM244Q5VVB8 128 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 OR8G2PQ6IF36 304 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 PGAP1Q75T13 922 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 VASH2Q86V25 355 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 LILRB2Q8N423 598 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 CCDC54Q8NEL0 328 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 SLC25A43Q8WUT9 341 aaPredicted RBP7.85□□□□□ -1.15
RTN4-206ENST00000394611 GGACTQ9BVM4 153 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 PLK3Q9H4B4 646 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 MMP25Q9NPA2 562 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 GDF2Q9UK05 429 aaPredicted RBP7.85□□□□□ -1.15
RTN4-206ENST00000394611 H2AFB1P0C5Y9 115 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 NDUFB7P17568 137 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 PGCP20142 388 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 MTCP1P56278 107 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 ERVS71-1P61550 626 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 HABP2Q14520 560 aaPredicted RBP7.85□□□□□ -1.15
RTN4-206ENST00000394611 ZNF74Q16587 644 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 SLC36A1Q7Z2H8 476 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 OTOSQ8NHW6 89 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 ASB17Q8WXJ9 295 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 PLPPR2Q96GM1 343 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 TIMP4Q99727 224 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 POLE3Q9NRF9 147 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 ZNF275Q9NSD4 429 aaPredicted RBP7.85□□□□□ -1.15
RTN4-206ENST00000394611 PCOLCE2Q9UKZ9 415 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 A0A087WUJ7 227 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 TGIF2-C20orf24A0A0A6YYL0 155 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 HSD17B6O14756 317 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 MT-ND4LP03901 98 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 PATE4P0C8F1 98 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 IAPPP10997 89 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 FZD5Q13467 585 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 MOB3CQ70IA8 216 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 RNF144BQ7Z419 303 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 SLC22A24Q8N4F4 322 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 OR2AE1Q8NHA4 323 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 SCGB1C1Q8TD33 95 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 HOXB13Q92826 284 aaPredicted RBP7.85□□□□□ -1.15
RTN4-206ENST00000394611 ZDHHC12Q96GR4 267 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 LMF2Q9BU23 707 aaKnown RBP7.85□□□□□ -1.15
RTN4-206ENST00000394611 NOTCH3Q9UM47 2321 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 A0A1W2PNV4 684 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 TCAPO15273 167 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 TRAPPC6AO75865 159 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 AK1P00568 194 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 MBP02144 154 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 SMIM6P0DI80 62 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 CX3CR1P49238 355 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 PMP22Q01453 160 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 LTC4SQ16873 150 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 TMEM128Q5BJH2 165 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 COMMD1Q8N668 190 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 SLAMF6Q96DU3 332 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 FAM103A1Q9BTL3 118 aaKnown RBP7.85□□□□□ -1.15
RTN4-206ENST00000394611 B3GALT5Q9Y2C3 310 aa7.85□□□□□ -1.15
RTN4-206ENST00000394611 PKDREJQ9NTG1 2253 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 TCRBV21S2A2A0A5A6 115 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 SNRPCP09234 159 aaKnown RBP7.84□□□□□ -1.15
RTN4-206ENST00000394611 GFERP55789 205 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 TAS2R31P59538 309 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 TRIM61Q5EBN2 209 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 ZNF385CQ66K41 422 aaPredicted RBP7.84□□□□□ -1.15
RTN4-206ENST00000394611 FIP1L1Q6UN15 594 aaKnown RBP7.84□□□□□ -1.15
RTN4-206ENST00000394611 TGIF2LXQ8IUE1 241 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 ASB5Q8WWX0 329 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 WDR34Q96EX3 536 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 OR8B4Q96RC9 309 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 CABLES2Q9BTV7 478 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 OR10A2Q9H208 303 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 CALHM2Q9HA72 323 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 PRSS37A4D1T9 235 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 C9JQL5 133 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 EFSO43281 561 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 ZNF25P17030 456 aaPredicted RBP7.84□□□□□ -1.15
RTN4-206ENST00000394611 IZUMO4Q1ZYL8 232 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 MPV17LQ2QL34 196 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 THNSL2Q86YJ6 484 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 ZNF610Q8N9Z0 462 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 OR1J1Q8NGS3 322 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 GPX8Q8TED1 209 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 PIGCQ92535 297 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 TVP23CQ96ET8 276 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 ADAT3Q96EY9 351 aaPredicted RBP7.84□□□□□ -1.15
RTN4-206ENST00000394611 OR5B12Q96R08 314 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 ELOVL1Q9BW60 279 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 SLCO5A1Q9H2Y9 848 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 C19orf12Q9NSK7 152 aa7.84□□□□□ -1.15
RTN4-206ENST00000394611 PLA2G3Q9NZ20 509 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms