RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 TMEM30BQ3MIR4 351 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 C5orf47Q569G3 176 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 CT45A1Q5HYN5 189 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 LDLRAP1Q5SW96 308 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 C6orf183Q5T699 404 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 ZNF660Q6AZW8 331 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 XKRXQ6PP77 449 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 C16orf62Q7Z3J2 963 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 AKAP14Q86UN6 197 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 RBM45Q8IUH3 476 aaKnown RBP1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 IFT20Q8IY31 132 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 PDIK1LQ8N165 341 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 CT45A3Q8NHU0 189 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 NABP1Q96AH0 204 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 HPDLQ96IR7 371 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 GALNT9Q9HCQ5 603 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 SLCO1B3Q9NPD5 702 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 SLC7A10Q9NS82 523 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 FARSBQ9NSD9 589 aaKnown RBP1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 VPREB3Q9UKI3 123 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 TRAV18A0A075B6X5 111 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 LINC01546A6NGU7 62 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 ANKRD30BLA7E2S9 258 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 SUPT3HB4E1H0 165 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 AIPO00170 330 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 OR7A10O76100 309 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 IFNA10P01566 189 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 HLA-HP01893 362 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 ACSM4P0C7M7 580 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 C21orf33P30042 268 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 DLSTP36957 453 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 ATP4BP51164 291 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 CSNK2A1P68400 391 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 LCN2P80188 198 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 NFATC2Q13469 925 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 CCDC157Q569K6 752 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 CXCL17Q6UXB2 119 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 TMPPEQ6ZT21 453 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 SETD3Q86TU7 594 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 PPFIBP2Q8ND30 876 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 CSNK2A3Q8NEV1 391 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 OR1S2Q8NGQ3 325 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 PIGXQ8TBF5 258 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 TOMM40LQ969M1 308 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 FAM131CQ96AQ9 280 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 SLITRK2Q9H156 845 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 METTL9Q9H1A3 318 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 FGF20Q9NP95 211 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 IFT46Q9NQC8 304 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 ATP6V1HQ9UI12 483 aa1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 ZNF223Q9UK11 482 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-202ENST00000359052 IGHV2-70DA0A0C4DH43 119 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 FOXI3A8MTJ6 420 aaPredicted RBP1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 HMSDA8MTL9 139 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 CRXO43186 299 aaPredicted RBP1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 H2BFMP0C1H6 154 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 RNF224P0DH78 156 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 EZRP15311 586 aaKnown RBP1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 CRABP1P29762 137 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 FGF9P31371 208 aaPredicted RBP1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 SELENOTP62341 195 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 RUNX1Q01196 453 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 MED21Q13503 144 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 VEPH1Q14D04 833 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 MAPK11Q15759 364 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 SNAI3Q3KNW1 292 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 RSBN1Q5VWQ0 802 aaPredicted RBP1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 FAHD2BQ6P2I3 314 aaPredicted RBP1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 GDPD4Q6W3E5 623 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 HEPN1Q6WQI6 88 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 RBMS3Q6XE24 437 aaKnown RBP1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 ZNF852Q6ZMS4 543 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 TMEM179BQ7Z7N9 219 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 LYG1Q8N1E2 194 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 CDC26Q8NHZ8 85 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 DDI1Q8WTU0 396 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 SCARB1Q8WTV0 552 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 SFT2D1Q8WV19 159 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 ULK4Q96C45 1275 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 FAHD2AQ96GK7 314 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 SLC6A7Q99884 636 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 B3GAT2Q9NPZ5 323 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 B4GALT7Q9UBV7 327 aa1.4□□□□□ -2.18
SMARCAD1-202ENST00000359052 APOBP04114 4563 aaKnown RBP1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 A0A1W2PQL4 384 aaPredicted RBP1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 FAM159BA6NKW6 160 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 SEC14L6B5MCN3 397 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 KPNA3O00505 521 aaPredicted RBP1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 TP53I11O14683 189 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 DLEU1O43261 78 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 PSTPIP1O43586 416 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 GSTZ1O43708 216 aaPredicted RBP1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 GPR137BO60478 399 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 WDR1O75083 606 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 ADAP1O75689 374 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 CA1P00915 261 aaPredicted RBP1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 MT-ND4P03905 459 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 PCCAP05165 728 aaPredicted RBP1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 CSF3P09919 207 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 OR4Q2P0C623 313 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 213.7 ms