RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 SLC5A6Q9Y289 635 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF281Q9Y2X9 895 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 NCOA6Q14686 2063 aaPredicted RBP11.12□□□□□ -0.63
DDX39A-202ENST00000324340 FREM1Q5H8C1 2179 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 TRAV1-2A0A0B4J238 106 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 RAB19A4D1S5 217 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 ACOD1A6NK06 481 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 SGCEO43556 437 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 GATBO75879 557 aaKnown RBP11.11□□□□□ -0.63
DDX39A-202ENST00000324340 ISG15P05161 165 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 CRYGSP22914 178 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 HSD11B1P28845 292 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 HAAOP46952 286 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 PSG4Q00888 419 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 TGFBR3Q03167 851 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 RSPO1Q2MKA7 263 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-202ENST00000324340 HFEQ30201 348 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 IDNKQ5T6J7 187 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 C9orf135Q5VTT2 229 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 OLFML2AQ68BL7 652 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 UNQ9370/PRO34162Q6UXP9 181 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 GLDNQ6ZMI3 551 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-202ENST00000324340 TMUB2Q71RG4 321 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 PRSS45Q7RTY3 260 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 C1orf162Q8NEQ5 155 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-202ENST00000324340 OR1S1Q8NH92 325 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 FGFBP3Q8TAT2 258 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 SMIM4Q8WVI0 70 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 RGP1Q92546 391 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-202ENST00000324340 PHYHIPQ92561 330 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 PHYHIPLQ96FC7 376 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF251Q9BRH9 671 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 PDCD10Q9BUL8 212 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 MRI1Q9BV20 369 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 COMMD4Q9H0A8 199 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 WNT5BQ9H1J7 359 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 C20orf85Q9H1P6 137 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 PLEK2Q9NYT0 353 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 MGAT4CQ9UBM8 478 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 TINAGQ9UJW2 476 aa11.11□□□□□ -0.63
DDX39A-202ENST00000324340 A0A096LPE4 126 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 TRBV5-5A0A0J9YX44 114 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 A0A1W2PPZ6 126 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 DOK2O60496 412 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 ALDOBP05062 364 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 EIF4EP06730 217 aaKnown RBP11.1□□□□□ -0.63
DDX39A-202ENST00000324340 HEXAP06865 529 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 COX5BP10606 129 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 RPA2P15927 270 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 ARR3P36575 388 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 CAV3P56539 151 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 P2RY6Q15077 328 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 TAF13Q15543 124 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 GABRA6Q16445 453 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 IGSF11Q5DX21 431 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 SFXN4Q6P4A7 337 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 GSG1LQ6UXU4 331 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 BEND4Q6ZU67 534 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF433Q8N7K0 673 aaPredicted RBP11.1□□□□□ -0.63
DDX39A-202ENST00000324340 SAMD12Q8N8I0 201 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF610Q8N9Z0 462 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 PXT1Q8NFP0 134 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 OR1F12Q8NHA8 337 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 LRRC46Q96FV0 321 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 CXorf58Q96LI9 332 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 PIGMQ9H3S5 423 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 OR52A1Q9UKL2 312 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 SLC22A13Q9Y226 551 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 ATMQ13315 3056 aa11.1□□□□□ -0.63
DDX39A-202ENST00000324340 A0A0G2JNJ9 132 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF503-AS2A6NEH8 195 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 E9PLN8 166 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 SULT1C2O00338 296 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 CREBL2O60519 120 aaPredicted RBP11.09□□□□□ -0.63
DDX39A-202ENST00000324340 UCHL1P09936 223 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 PATE4P0C8F1 98 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 OPRM1P35372 400 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 MNDAP41218 407 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 CX3CR1P49238 355 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF121P58317 390 aaPredicted RBP11.09□□□□□ -0.63
DDX39A-202ENST00000324340 PMPCAQ10713 525 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 INSL4Q14641 139 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 GUCA2BQ16661 112 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 ACSM3Q53FZ2 586 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF626Q68DY1 528 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF774Q6NX45 483 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 SVBPQ8N300 66 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF676Q8N7Q3 588 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 OR13C5Q8NGS8 318 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 AKR7LQ8NHP1 331 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 SPTSSAQ969W0 71 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 PPP1R14AQ96A00 147 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 DMRTA2Q96SC8 542 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 ABHD1Q96SE0 405 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 VKORC1Q9BQB6 163 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 PBOV1Q9GZY1 135 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 SLC17A5Q9NRA2 495 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF629Q9UEG4 869 aaPredicted RBP11.09□□□□□ -0.63
DDX39A-202ENST00000324340 Q9UFV3 132 aa11.09□□□□□ -0.63
DDX39A-202ENST00000324340 SHISA3A0PJX4 238 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms