RNA–Protein interactions for RNA: ENST00000550309.1

AL355112.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL355112.1, Length 1,236 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355112.1-201ENST00000550309 ZIM3Q96PE6 472 aa4.3□□□□□ -1.72
AL355112.1-201ENST00000550309 ULBP2Q9BZM5 246 aa4.3□□□□□ -1.72
AL355112.1-201ENST00000550309 TRIM4Q9C037 500 aa4.3□□□□□ -1.72
AL355112.1-201ENST00000550309 SLC25A22Q9H936 323 aa4.3□□□□□ -1.72
AL355112.1-201ENST00000550309 SH2D2AQ9NP31 389 aa4.3□□□□□ -1.72
AL355112.1-201ENST00000550309 ABCB10Q9NRK6 738 aa4.3□□□□□ -1.72
AL355112.1-201ENST00000550309 MARCH5Q9NX47 278 aa4.3□□□□□ -1.72
AL355112.1-201ENST00000550309 CLEC2DQ9UHP7 191 aa4.3□□□□□ -1.72
AL355112.1-201ENST00000550309 PRG3Q9Y2Y8 225 aaPredicted RBP4.3□□□□□ -1.72
AL355112.1-201ENST00000550309 ZNF638Q14966 1978 aaKnown RBP4.3□□□□□ -1.72
AL355112.1-201ENST00000550309 NUP210Q8TEM1 1887 aaPredicted RBP4.3□□□□□ -1.72
AL355112.1-201ENST00000550309 CHD7Q9P2D1 2997 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 PHF3Q92576 2039 aaKnown RBP4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 ARL5CA6NH57 179 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 HIDE1A8MVS5 230 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 LINC01565O15544 149 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 B4GALT5O43286 388 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 PI15O43692 258 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 CALUO43852 315 aaPredicted RBP4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 SERF1AO75920 110 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 CDK14O94921 469 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 LCA5LO95447 670 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 IGHV3-23P01764 117 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 FOLR2P14207 255 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 ZNF3P17036 446 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 GGT1P19440 569 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 HSPA9P38646 679 aaKnown RBP4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 RANBP1P43487 201 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 RND2P52198 227 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 ZNF45Q02386 682 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 KIAA0087Q14695 138 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 KYAT1Q16773 422 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 TMEM31Q5JXX7 168 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 FHL5Q5TD97 284 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 MARC1Q5VT66 337 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 DUPD1Q68J44 220 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 THOC7Q6I9Y2 204 aaKnown RBP4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 RWDD4Q6NW29 188 aaKnown RBP4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 FBXL22Q6P050 247 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 WDR82Q6UXN9 313 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 CCDC121Q6ZUS5 278 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 MRPL55Q7Z7F7 128 aaKnown RBP4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 OAFQ86UD1 273 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 CBLN2Q8IUK8 224 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 SPAG16Q8N0X2 631 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 OR51E1Q8TCB6 317 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 TMEM239Q8WW34 195 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 GEMIN6Q8WXD5 167 aaKnown RBP4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 TMEM230Q96A57 120 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 SCGB3A2Q96PL1 93 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 ZNF702PQ9H963 129 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 PARVGQ9HBI0 331 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 TMBIM4Q9HC24 238 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 MS4A12Q9NXJ0 267 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 MRM2Q9UI43 246 aaKnown RBP4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 KLK13Q9UKR3 277 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 SNX12Q9UMY4 172 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 PRELID1Q9Y255 219 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 CHD9Q3L8U1 2897 aa4.29□□□□□ -1.72
AL355112.1-201ENST00000550309 NOTCH3Q9UM47 2321 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 MYH10P35580 1976 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 TRAV39A0A0B4J263 110 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 GMNCA6NCL1 334 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 NCBP2LA6PVI3 153 aaKnown RBP4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 TNFSF11O14788 317 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 ERI3O43414 337 aaKnown RBP4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 ZNF354AO60765 605 aaPredicted RBP4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 ZMPSTE24O75844 475 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 UTS2O95399 124 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 HPRT1P00492 218 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 HPNP05981 417 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 GFAPP14136 432 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 TCP1P17987 556 aaKnown RBP4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 SHC1P29353 583 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 DIO3P55073 304 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 SKP1P63208 163 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 RPS21P63220 83 aaKnown RBP4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 PAFAH1B2P68402 229 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 BASP1P80723 227 aaKnown RBP4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 C2orf54Q08AI8 447 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 DYNC1I2Q13409 638 aaKnown RBP4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 SMUG1Q53HV7 270 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 WDR59Q6PJI9 974 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 ZNF329Q86UD4 541 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 ZNF440Q8IYI8 595 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 ARRDC1Q8N5I2 433 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 LINC00469Q8N7U9 141 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 WDR31Q8NA23 367 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 RPUSD4Q96CM3 377 aaKnown RBP4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 ZNF599Q96NL3 588 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 CGREF1Q99674 301 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 GPR21Q99679 349 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 NICN1Q9BSH3 213 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 CHRNA10Q9GZZ6 450 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 DEFB127Q9H1M4 99 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 C1orf198Q9H425 327 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 SLC39A1Q9NY26 324 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 Q9UF83 564 aa4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 PAIP2BQ9ULR5 123 aaKnown RBP4.28□□□□□ -1.72
AL355112.1-201ENST00000550309 HES2Q9Y543 173 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms