RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 FTMTQ8N4E7 242 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 CSNK2A3Q8NEV1 391 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 ITPKCQ96DU7 683 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 COX4I2Q96KJ9 171 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 LPAR2Q9HBW0 351 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 MYOZ1Q9NP98 299 aaPredicted RBP9.38□□□□□ -0.91
APTX-230ENST00000494649 DLL4Q9NR61 685 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 C1orf123Q9NWV4 160 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 SCN3BQ9NY72 215 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 CNOT2Q9NZN8 540 aaKnown RBP9.38□□□□□ -0.91
APTX-230ENST00000494649 EXOSC1Q9Y3B2 195 aaKnown RBP9.38□□□□□ -0.91
APTX-230ENST00000494649 CR1P17927 2039 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 IRGMA1A4Y4 181 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 MYL12BO14950 172 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 MTRF1O75570 445 aaKnown RBP9.38□□□□□ -0.91
APTX-230ENST00000494649 INMTO95050 263 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 PIPP12273 146 aaPredicted RBP9.38□□□□□ -0.91
APTX-230ENST00000494649 EEF1B2P24534 225 aaKnown RBP9.38□□□□□ -0.91
APTX-230ENST00000494649 SLC3A1Q07837 685 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 TMPRSS11AQ6ZMR5 421 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 ZDHHC23Q8IYP9 409 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 DEFB108BQ8NET1 73 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 OR13C5Q8NGS8 318 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 RPL3LQ92901 407 aaKnown RBP9.38□□□□□ -0.91
APTX-230ENST00000494649 SEH1LQ96EE3 360 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 MRPL48Q96GC5 212 aaKnown RBP9.38□□□□□ -0.91
APTX-230ENST00000494649 RNF170Q96K19 258 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 PLCXD1Q9NUJ7 323 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 ENPP5Q9UJA9 477 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 ZNF391Q9UJN7 358 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 CAB39Q9Y376 341 aaPredicted RBP9.38□□□□□ -0.91
APTX-230ENST00000494649 V9GYS6 101 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 TLN2Q9Y4G6 2542 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.37□□□□□ -0.91
APTX-230ENST00000494649 OR4C45A6NMZ5 311 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 NDUFS8O00217 210 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 CDIPTO14735 213 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 NRASP01111 189 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 CDK1P06493 297 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 UBCP0CG48 685 aaKnown RBP9.37□□□□□ -0.91
APTX-230ENST00000494649 SLC25A16P16260 332 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 GIFP27352 417 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 CD200P41217 278 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 SOX2P48431 317 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 ZNF154Q13106 437 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 OR13C3Q8NGS6 347 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 OR5AK2Q8NH90 309 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 OR5P3Q8WZ94 311 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 FGGYQ96C11 551 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 ADAT3Q96EY9 351 aaPredicted RBP9.37□□□□□ -0.91
APTX-230ENST00000494649 JAM3Q9BX67 310 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 SLC22A4Q9H015 551 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 FKBP14Q9NWM8 211 aa9.37□□□□□ -0.91
APTX-230ENST00000494649 A0A1B0GWJ7 208 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 ANKRD61A6NGH8 418 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 ZNF732B4DXR9 585 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 PLATP00750 562 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 CST4P01036 141 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 CRHBPP24387 322 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 TMEM33P57088 247 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 SLC35A2P78381 396 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 PLPP7Q8NBV4 271 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 OR1M1Q8NGA1 313 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 CLDND2Q8NHS1 167 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 ORAI1Q96D31 301 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 HIST1H2AAQ96QV6 131 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 OR5M11Q96RB7 305 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 GAL3ST1Q99999 423 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 BABAM2Q9NXR7 383 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 IGHV3OR15-7A0A075B7D8 119 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 FAM230AA0A1W2PPH8 454 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 TMEM178BH3BS89 294 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 MT-ND2P03891 347 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 CCL1P22362 96 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 CD80P33681 288 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 MAP2K4P45985 399 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 MRPS11P82912 194 aaKnown RBP9.36□□□□□ -0.91
APTX-230ENST00000494649 MED21Q13503 144 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 CDK5R1Q15078 307 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 ZMYND11Q15326 602 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 MED22Q15528 200 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 TMEM249Q2WGJ8 235 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 TSEN15Q8WW01 171 aaKnown RBP9.36□□□□□ -0.91
APTX-230ENST00000494649 RGP1Q92546 391 aaPredicted RBP9.36□□□□□ -0.91
APTX-230ENST00000494649 MYDGFQ969H8 173 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 TIMD4Q96H15 378 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 NKX3-1Q99801 234 aaPredicted RBP9.36□□□□□ -0.91
APTX-230ENST00000494649 MICU1Q9BPX6 476 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 RTL8AQ9BWD3 113 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 COMMD4Q9H0A8 199 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 FN3KRPQ9HA64 309 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 TRIM36Q9NQ86 728 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 C14orf119Q9NWQ9 140 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 ERGIC3Q9Y282 383 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 TPRKBQ9Y3C4 175 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 MPC1Q9Y5U8 109 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 NPTNQ9Y639 398 aa9.36□□□□□ -0.91
APTX-230ENST00000494649 AKR7A2O43488 359 aa9.35□□□□□ -0.91
APTX-230ENST00000494649 RHBDL1O75783 438 aa9.35□□□□□ -0.91
APTX-230ENST00000494649 LY6G6DO95868 133 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms