RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 PIFOQ8TCI5 191 aa11.13□□□□□ -0.63
SAMM50-204ENST00000493161 GNPDA2Q8TDQ7 276 aa11.13□□□□□ -0.63
SAMM50-204ENST00000493161 SGCDQ92629 289 aa11.13□□□□□ -0.63
SAMM50-204ENST00000493161 PPP1R14AQ96A00 147 aa11.13□□□□□ -0.63
SAMM50-204ENST00000493161 PAPOLGQ9BWT3 736 aaKnown RBP11.13□□□□□ -0.63
SAMM50-204ENST00000493161 EFCAB1Q9HAE3 211 aa11.13□□□□□ -0.63
SAMM50-204ENST00000493161 DNAJC27Q9NZQ0 273 aa11.13□□□□□ -0.63
SAMM50-204ENST00000493161 SAMD4AQ9UPU9 718 aaKnown RBP11.13□□□□□ -0.63
SAMM50-204ENST00000493161 ZNF878C9JN71 531 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 ANGPTL7O43827 346 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 TIPRLO75663 272 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 ACAA1P09110 424 aaPredicted RBP11.12□□□□□ -0.63
SAMM50-204ENST00000493161 ACKR3P25106 362 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 POU1F1P28069 291 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 RRM2P31350 389 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 BMXP51813 675 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 SMIM11AP58511 58 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 ERVFRD-1P60508 538 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 CRMP1Q14194 572 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 LRRC75BQ2VPJ9 315 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 HACD2Q6Y1H2 254 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 LINC00471Q8N535 108 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 ZNRF1Q8ND25 227 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 PYURFQ96I23 114 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 CLPTM1LQ96KA5 538 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 AMELYQ99218 206 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 MEGF9Q9H1U4 602 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 BRD7Q9NPI1 651 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 NECAP2Q9NVZ3 263 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 SF3B6Q9Y3B4 125 aaKnown RBP11.12□□□□□ -0.63
SAMM50-204ENST00000493161 CDH10Q9Y6N8 788 aa11.12□□□□□ -0.63
SAMM50-204ENST00000493161 IGKV1D-17A0A075B6S4 117 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 NKX6-3A6NJ46 265 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 ZNF850A8MQ14 1090 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 ADARB2-AS1A8MUL3 147 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 SIGLEC5O15389 551 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 RHBDL1O75783 438 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 SASH3O75995 380 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 SPI1P17947 270 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 FMO3P31513 532 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 MSX2P35548 267 aaPredicted RBP11.11□□□□□ -0.63
SAMM50-204ENST00000493161 GNALP38405 381 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 CAV3P56539 151 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 ZNF121P58317 390 aaPredicted RBP11.11□□□□□ -0.63
SAMM50-204ENST00000493161 EIF2B1Q14232 305 aaKnown RBP11.11□□□□□ -0.63
SAMM50-204ENST00000493161 TEX30Q5JUR7 227 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 ZBTB37Q5TC79 503 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 C11orf88Q6PI97 169 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 HDXQ7Z353 690 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 MKXQ8IYA7 352 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 OR9Q2Q8NGE9 314 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 OR5P3Q8WZ94 311 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 PHF21AQ96BD5 680 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 MED30Q96HR3 178 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 NKX3-1Q99801 234 aaPredicted RBP11.11□□□□□ -0.63
SAMM50-204ENST00000493161 MICU1Q9BPX6 476 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 BTBD10Q9BSF8 475 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 NMNAT2Q9BZQ4 307 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 DNTTIP1Q9H147 329 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 RANBP3Q9H6Z4 567 aaPredicted RBP11.11□□□□□ -0.63
SAMM50-204ENST00000493161 SP140LQ9H930 580 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 ZNF702PQ9H963 129 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 SERTAD4Q9NUC0 356 aa11.11□□□□□ -0.63
SAMM50-204ENST00000493161 OR2AT4A6NND4 320 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 H0YAE9 185 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 FBXO24O75426 580 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 DCTDP32321 178 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 GABRA2P47869 451 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 GRB2P62993 217 aaKnown RBP11.1□□□□□ -0.63
SAMM50-204ENST00000493161 PRDX4Q13162 271 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 DMRTC1Q5HYR2 192 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 LINC01590Q5TEZ4 76 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 FOXB2Q5VYV0 432 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 FAM185AQ8N0U4 392 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 DYNAPQ8N1N2 210 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 OR52L1Q8NGH7 329 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 OR6K6Q8NGW6 343 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 OR10Z1Q8NGY1 313 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 OR4Q3Q8NH05 313 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 HPSE2Q8WWQ2 592 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 R3HDM4Q96D70 268 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 LYZL4Q96KX0 146 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 ABHD6Q9BV23 337 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 RTL8AQ9BWD3 113 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 FAM234AQ9H0X4 552 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 GORASP2Q9H8Y8 452 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 VIPAS39Q9H9C1 493 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 C19orf12Q9NSK7 152 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 NLKQ9UBE8 527 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 CD300AQ9UGN4 299 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 ZNF222Q9UK12 451 aa11.1□□□□□ -0.63
SAMM50-204ENST00000493161 NOTCH3Q9UM47 2321 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 DNAH3Q8TD57 4116 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 NDUFAB1O14561 156 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 XPNPEP2O43895 674 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 GASTP01350 101 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 FABP3P05413 133 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 PSG2P11465 335 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 HSD11B1P28845 292 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 IFNGR2P38484 337 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms