RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 CRYM-AS1A6NIL9 109 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 ZNF729A6NN14 1252 aaPredicted RBP12.65□□□□□ -0.38
NR1H3-220ENST00000481020 ETV2O00321 342 aaPredicted RBP12.65□□□□□ -0.38
NR1H3-220ENST00000481020 GPR137BO60478 399 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 SFTPBP07988 381 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 OR8U8P0C7N1 319 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 NAT2P11245 290 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 FOSL2P15408 326 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 ZNF133P52736 654 aaPredicted RBP12.65□□□□□ -0.38
NR1H3-220ENST00000481020 IGSF11Q5DX21 431 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 RBMS3Q6XE24 437 aaKnown RBP12.65□□□□□ -0.38
NR1H3-220ENST00000481020 SULF2Q8IWU5 870 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 ZNF321PQ8N8H1 164 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 WDSUB1Q8N9V3 476 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 TMEM104Q8NE00 496 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 OR2I1PQ8NGU4 316 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 ARHGAP5-AS1Q96IT6 56 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 MRPL13Q9BYD1 178 aaKnown RBP12.65□□□□□ -0.38
NR1H3-220ENST00000481020 RAB33BQ9H082 229 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 BCO1Q9HAY6 547 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 KCNJ16Q9NPI9 418 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 TCFL5Q9UL49 500 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 KCNIP3Q9Y2W7 256 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 TMED3Q9Y3Q3 217 aa12.65□□□□□ -0.38
NR1H3-220ENST00000481020 MKI67P46013 3256 aaKnown RBP12.64□□□□□ -0.39
NR1H3-220ENST00000481020 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 TLCD2A6NGC4 264 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 GLRA1P23415 457 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 CTSSP25774 331 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 SULT1A1P50225 295 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 GRB2P62993 217 aaKnown RBP12.64□□□□□ -0.39
NR1H3-220ENST00000481020 SLC35A1P78382 337 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 TLE3Q04726 772 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 IL13RA2Q14627 380 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 MIDNQ504T8 468 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 OTPQ5XKR4 325 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 C9orf40Q8IXQ3 194 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 SLC22A18ASQ8N1D0 253 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 OR1N1Q8NGS0 311 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 GALNT14Q96FL9 552 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 TREM2Q9NZC2 230 aa12.64□□□□□ -0.39
NR1H3-220ENST00000481020 A0A087WWC5 75 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 RHPN2P1A8MT19 583 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 UMAD1C9J7I0 102 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 M0R036 132 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 CRTAPO75718 401 aaPredicted RBP12.63□□□□□ -0.39
NR1H3-220ENST00000481020 RAD51DO75771 328 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 SNRNP70P08621 437 aaKnown RBP12.63□□□□□ -0.39
NR1H3-220ENST00000481020 HCKP08631 526 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 HOXB5P09067 269 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 GIMD1P0DJR0 217 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 NR2C1P13056 603 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 HLA-DOBP13765 273 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 BCKDHBP21953 392 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 CHATP28329 748 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 FMODQ06828 376 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 C17orf67Q0P5P2 114 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 SPEM2Q0P670 501 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 SQSTM1Q13501 440 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 GKN2Q86XP6 184 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 PRR22Q8IZ63 422 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 BHLHE23Q8NDY6 225 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 OR10S1Q8NGN2 331 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 OR51E1Q8TCB6 317 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 NTNG2Q96CW9 530 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 SUCNR1Q9BXA5 334 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 TOLLIPQ9H0E2 274 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 SPACA1Q9HBV2 294 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 C19orf12Q9NSK7 152 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 TMEM184BQ9Y519 407 aaPredicted RBP12.63□□□□□ -0.39
NR1H3-220ENST00000481020 C2orf16Q68DN1 1984 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 KIF26BQ2KJY2 2108 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 MPDZO75970 2070 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 TMEM131Q92545 1883 aa12.63□□□□□ -0.39
NR1H3-220ENST00000481020 LOC101059948A0A1B0GTJ6 334 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 CXorf65A6NEN9 183 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 A6NLC8 198 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 AGPAT2O15120 278 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 ZNF354AO60765 605 aaPredicted RBP12.62□□□□□ -0.39
NR1H3-220ENST00000481020 CLN5O75503 358 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 PTGER4P35408 488 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 OR3A4PP47883 348 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 HTR5AP47898 357 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 CAMLGP49069 296 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 SSTP61278 116 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 POU3F1Q03052 451 aaPredicted RBP12.62□□□□□ -0.39
NR1H3-220ENST00000481020 CLINT1Q14677 625 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 KRBOX4Q5JUW0 171 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 RPUSD3Q6P087 351 aaKnown RBP12.62□□□□□ -0.39
NR1H3-220ENST00000481020 ZNF600Q6ZNG1 722 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 Q6ZSR3 168 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 OR51T1Q8NGJ9 327 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 PP6455Q8WZ26 134 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 GPER1Q99527 375 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 OR11A1Q9GZK7 315 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 EIF5A2Q9GZV4 153 aaKnown RBP12.62□□□□□ -0.39
NR1H3-220ENST00000481020 HIPK2Q9H2X6 1198 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 PLA2G2EQ9NZK7 142 aa12.62□□□□□ -0.39
NR1H3-220ENST00000481020 PPIHO43447 177 aaKnown RBP12.62□□□□□ -0.39
NR1H3-220ENST00000481020 TGOLN2O43493 480 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms