RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 WFDC11Q8NEX6 87 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 Q8NFD4 153 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 OR56B2PQ8NGI1 322 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 OR14K1Q8NGZ2 314 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 OR5P3Q8WZ94 311 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 FCGR1BQ92637 280 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 UBE2FQ969M7 185 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 PERPQ96FX8 193 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 MEGF10Q96KG7 1140 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 Q96MF0 132 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 FOXN4Q96NZ1 517 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 OR2V2Q96R30 315 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 VRK1Q99986 396 aaPredicted RBP4.3□□□□□ -1.72
HDAC6-223ENST00000480525 MICU1Q9BPX6 476 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 ADAT1Q9BUB4 502 aaKnown RBP4.3□□□□□ -1.72
HDAC6-223ENST00000480525 RTL8AQ9BWD3 113 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 MND1Q9BWT6 205 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 REG4Q9BYZ8 158 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 PKIBQ9C010 78 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 COMMD4Q9H0A8 199 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 TPK1Q9H3S4 243 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 FN3KRPQ9HA64 309 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 GPR84Q9NQS5 396 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 TMEM106BQ9NUM4 274 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 BABAM2Q9NXR7 383 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 PTTG3PQ9NZH4 202 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 FRRS1LQ9P0K9 344 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF319Q9P2F9 582 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 PPP1R3CQ9UQK1 317 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 ERGIC3Q9Y282 383 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 MYRFQ9Y2G1 1151 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 LRCH1Q9Y2L9 728 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 POLDIP2Q9Y2S7 368 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 FN1P02751 2386 aaKnown RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 IGHV4-30-2A0A087WSY4 118 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 TRAV38-1A0A0B4J264 116 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 A0A1B0GVI7 797 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ANKRD61A6NGH8 418 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 SRRM5B3KS81 715 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 B4DSR2 109 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ANKRD65E5RJM6 399 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 F5H0A9 414 aaPredicted RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 TMEM178BH3BS89 294 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 J3QLI3 93 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 M0R129 80 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 TNFRSF13BO14836 293 aaPredicted RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 TPD52L2O43399 206 aaKnown RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 SYT7O43581 403 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 CD5LO43866 347 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 SSX4O60224 188 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 SC5DO75845 299 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ZFPL1O95159 310 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 IGHV2-70P01814 119 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ALDOBP05062 364 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 CD2P06729 351 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 MRPL3P09001 348 aaKnown RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 INHBBP09529 407 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 NAT2P11245 290 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 PRKACBP22694 351 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ACKR3P25106 362 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 PSMB10P40306 273 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ALDH3B1P43353 468 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 MAGEB1P43366 347 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 GPR6P46095 362 aaPredicted RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 BMXP51813 675 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 FUT6P51993 359 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 DVL1P1P54792 670 aaPredicted RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 BTG1P62324 171 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 CCL8P80075 99 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 MFGE8Q08431 387 aaPredicted RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 IL24Q13007 206 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF154Q13106 437 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 TPBGQ13641 420 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 HLXQ14774 488 aaPredicted RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 CNN3Q15417 329 aaKnown RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 OR8G1Q15617 311 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 TMEM249Q2WGJ8 235 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF404Q494X3 552 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 KCTD21Q4G0X4 260 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 SPATA46Q5T0L3 261 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 DCDC5Q6ZRR9 648 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 BCDIN3DQ7Z5W3 292 aaKnown RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 NAA40Q86UY6 237 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 SERPINA12Q8IW75 414 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 PRSS35Q8N3Z0 413 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 RFLNBQ8N5W9 214 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF525Q8N782 197 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 NANOGP1Q8N7R0 232 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ZSCAN4Q8NAM6 433 aaPredicted RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 OR2Z1Q8NG97 314 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 OR11L1Q8NGX0 322 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 OR2AE1Q8NHA4 323 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 CNIH3Q8TBE1 160 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 OR51E1Q8TCB6 317 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 GPR148Q8TDV2 347 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 HPSE2Q8WWQ2 592 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 GGHQ92820 318 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 LYZL4Q96KX0 146 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 C4orf36Q96KX1 117 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 POFUT1Q9H488 388 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms