RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 EIF2S3LQ2VIR3 472 aaKnown RBP12.78□□□□□ -0.36
CXCL12-201ENST00000343575 UNQ9370/PRO34162Q6UXP9 181 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 NLRC3Q7RTR2 1065 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 OR51A4Q8NGJ6 313 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 OR5AK2Q8NH90 309 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 SMIM4Q8WVI0 70 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 DACT3Q96B18 629 aaPredicted RBP12.78□□□□□ -0.36
CXCL12-201ENST00000343575 BOD1Q96IK1 185 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 ZNF75AQ96N20 296 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 DMRTA2Q96SC8 542 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 PROCRQ9UNN8 238 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 A0A1B0GW55 424 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 TOR1AO14656 332 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 PIN1P1O15428 100 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 GPRIN2O60269 458 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 ARL6IP5O75915 188 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 TTRP02766 147 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 ACSM4P0C7M7 580 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 DUX4L2P0CJ85 424 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 DUX4L3P0CJ86 424 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 DUX4L4P0CJ87 422 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 DUX4L5P0CJ88 424 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 DUX4L6P0CJ89 424 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 DUX4L7P0CJ90 424 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 SLC2A1P11166 492 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 CALCRP30988 508 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 PSMA6P60900 246 aaKnown RBP12.78□□□□□ -0.36
CXCL12-201ENST00000343575 ACSM3Q53FZ2 586 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 PABPC1L2AQ5JQF8 200 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 SFRP5Q5T4F7 317 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 CEACAM19Q7Z692 300 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 OR1F12Q8NHA8 337 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 C15orf40Q8WUR7 153 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 PHYHIPQ92561 330 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 SFXN3Q9BWM7 321 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 SHARPINQ9H0F6 387 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 BRD7Q9NPI1 651 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 SLC17A5Q9NRA2 495 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 SDHAF2Q9NX18 166 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 DUX4Q9UBX2 424 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 PFDN2Q9UHV9 154 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 OR52A1Q9UKL2 312 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 MYO7BQ6PIF6 2116 aa12.77□□□□□ -0.36
CXCL12-201ENST00000343575 KALRNO60229 2985 aa12.77□□□□□ -0.36
CXCL12-201ENST00000343575 TRBV5-5A0A0J9YX44 114 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 TMEM212A6NML5 194 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 F5H5K5 113 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 H3BSH0 61 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 TSPAN4O14817 238 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 B3GALNT1O75752 331 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 RAD51DO75771 328 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 ZNF121P58317 390 aaPredicted RBP12.77□□□□□ -0.37
CXCL12-201ENST00000343575 PCBD1P61457 104 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 TSPAN5P62079 268 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 GRB2P62993 217 aaKnown RBP12.77□□□□□ -0.37
CXCL12-201ENST00000343575 MRPS10P82664 201 aaKnown RBP12.77□□□□□ -0.37
CXCL12-201ENST00000343575 RBPJQ06330 500 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 ZNF584Q8IVC4 421 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 ORAI1Q96D31 301 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 OR14A2Q96R54 314 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 MRI1Q9BV20 369 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 C20orf85Q9H1P6 137 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 GPN1Q9HCN4 374 aaPredicted RBP12.77□□□□□ -0.37
CXCL12-201ENST00000343575 SPATA2Q9UM82 520 aa12.77□□□□□ -0.37
CXCL12-201ENST00000343575 LOC100509620A0A075B734 347 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 SULT1B1O43704 296 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 GATBO75879 557 aaKnown RBP12.76□□□□□ -0.37
CXCL12-201ENST00000343575 PSMB1P20618 241 aaKnown RBP12.76□□□□□ -0.37
CXCL12-201ENST00000343575 HSD11B1P28845 292 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 CX3CR1P49238 355 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 SRP9P49458 86 aaKnown RBP12.76□□□□□ -0.37
CXCL12-201ENST00000343575 TAF13Q15543 124 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 CXorf67Q86X51 503 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-201ENST00000343575 REG4Q9BYZ8 158 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 PBOV1Q9GZY1 135 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 METTL17Q9H7H0 456 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-201ENST00000343575 NPDC1Q9NQX5 325 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-201ENST00000343575 GTF2A1LQ9UNN4 478 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 IGSF10Q6WRI0 2623 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 A0A1W2PPK0 400 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 SNRPGP15A8MWD9 76 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 ATP6V1G2-DDX39BF2Z307 99 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 IL5P05113 134 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 CD3GP09693 182 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 SSTR2P30874 369 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 CA7P43166 264 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 RAB1AP62820 205 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 UBE2NLQ5JXB2 153 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 EIF4E3Q8N5X7 224 aaKnown RBP12.76□□□□□ -0.37
CXCL12-201ENST00000343575 ZNF676Q8N7Q3 588 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 OR8B12Q8NGG6 310 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 ASB13Q8WXK3 278 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 ST8SIA4Q92187 359 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 VKORC1Q9BQB6 163 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 SOX7Q9BT81 388 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 MEMO1Q9Y316 297 aa12.76□□□□□ -0.37
CXCL12-201ENST00000343575 A0A1B0GTI1 187 aa12.75□□□□□ -0.37
CXCL12-201ENST00000343575 A0A1W2PR80 420 aa12.75□□□□□ -0.37
CXCL12-201ENST00000343575 PLSCR5A0PG75 271 aa12.75□□□□□ -0.37
CXCL12-201ENST00000343575 ACOD1A6NK06 481 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms