RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 OR5M8Q8NGP6 311 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 SECTM1Q8WVN6 248 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 ELOVL1Q9BW60 279 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 OR5H15A6NDH6 313 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 OR5H1A6NKK0 313 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 SH3BGRLO75368 114 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 SORBS2O94875 1100 aaKnown RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 EPHA2P29317 976 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 PTGFRP43088 359 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 FAM166AQ6J272 317 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 GRAMD2BQ96HH9 432 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 ULBP3Q9BZM4 244 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 IL19Q9UHD0 177 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 FAM72CH0Y354 149 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 CD99P14209 185 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 SERPINA2P20848 420 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 RPL12P30050 165 aaKnown RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 CEBPEQ15744 281 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 FAM72AQ5TYM5 149 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 FAM72DQ6L9T8 149 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 FAM72BQ86X60 149 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 RHBDD1Q8TEB9 315 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 TOLLIPQ9H0E2 274 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 STARD10Q9Y365 291 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 F5H5K5 113 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 ZNF77Q15935 545 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 ZNF626Q68DY1 528 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 SLC24A4Q8NFF2 622 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 HLA-CQ95604 372 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 PLXND1Q9Y4D7 1925 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 TRBV4-1A0A0J9YWV2 114 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 H0YGG7 62 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 PCBP4P57723 403 aaKnown RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 GTF3C1Q12789 2109 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 GLIS1Q8NBF1 620 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 RBKSQ9H477 322 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 GCGP01275 180 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 IGHMP01871 453 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 KCNAB1Q14722 419 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 CASTOR1Q8WTX7 329 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 TMEM38BQ9NVV0 291 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 A0A0A6YYJ9 748 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 SLC16A7O60669 478 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 FABP4P15090 132 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 CDKN2AP42771 156 aaKnown RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 LRRC10Q5BKY1 277 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 CD200R1LQ6Q8B3 271 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 GDF7Q7Z4P5 450 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 RBMXL3Q8N7X1 1067 aaKnown RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 OR13G1Q8NGZ3 307 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 OR4S2Q8NH73 311 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 NPRL2Q8WTW4 380 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 ZCCHC14Q8WYQ9 949 aaKnown RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 JSRP1Q96MG2 331 aaPredicted RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 NOL4LQ96MY1 436 aaPredicted RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 FAM173AQ9BQD7 235 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 MYEF2Q9P2K5 600 aaKnown RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 H7BYZ3 331 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 NUPL2O15504 423 aaKnown RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 OR7C1O76099 320 aaPredicted RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 SMIM17P0DL12 118 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 MC5RP33032 325 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 UCP3P55916 312 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 RPS20P60866 119 aaKnown RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 RHBDD2Q6NTF9 364 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 OR8B4Q96RC9 309 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 SIGLEC7Q9Y286 467 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 A0A1B0GWA3 101 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 SCO2O43819 266 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 PDGFBP01127 241 aaPredicted RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 CLEC2LP0C7M8 214 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 SLC19A1P41440 591 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 ARL16Q0P5N6 197 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 IAH1Q2TAA2 248 aaPredicted RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 FFAR4Q5NUL3 377 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 HSD11B1LQ7Z5J1 315 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 MUC20Q8N307 709 aaPredicted RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 FAM110BQ8TC76 370 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 AMDHD2Q9Y303 409 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 OR52A4PA6NMU1 304 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 H0Y8G0 127 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 MPIG6BO95866 241 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 MMP11P24347 488 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 PRRX1P54821 245 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 RHOBP62745 196 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 INPP5JQ15735 1006 aaPredicted RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 GUCA2BQ16661 112 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 PIP5KL1Q5T9C9 394 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 ADOQ96SZ5 270 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 OSGIN2Q9Y236 505 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 KRASP01116 189 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 PIANPQ8IYJ0 282 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 COX14Q96I36 57 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 MMP25Q9NPA2 562 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 TANC2Q9HCD6 1990 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 PRRG2O14669 202 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 SLC25A17O43808 307 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 IL2RAP01589 272 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 CTSOP43234 321 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms