RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 CEACAM21Q3KPI0 293 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 FAM76BQ5HYJ3 339 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 ZNF529Q6P280 563 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 CD200R1LQ6Q8B3 271 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 UNQ9370/PRO34162Q6UXP9 181 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 ZDHHC23Q8IYP9 409 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 ZCCHC24Q8N2G6 241 aaKnown RBP11.97□□□□□ -0.49
VPS25-201ENST00000253794 OR2Z1Q8NG97 314 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 OR10AD1Q8NGE0 317 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 HPSE2Q8WWQ2 592 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 OR5P3Q8WZ94 311 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 PAPOLGQ9BWT3 736 aaKnown RBP11.97□□□□□ -0.49
VPS25-201ENST00000253794 BARX1Q9HBU1 254 aaPredicted RBP11.97□□□□□ -0.49
VPS25-201ENST00000253794 VCX3AQ9NNX9 186 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.96□□□□□ -0.49
VPS25-201ENST00000253794 ANXA2P2A6NMY6 339 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 ZNF850A8MQ14 1090 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 ZNF879B4DU55 563 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 CCRL2O00421 344 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 SPRY3O43610 288 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 GATBO75879 557 aaKnown RBP11.96□□□□□ -0.49
VPS25-201ENST00000253794 SERPINA3P01011 423 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 NRASP01111 189 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 IGHV4-39P01824 125 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 HLA-DPB1P04440 258 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 CD2P06729 351 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 HSMCR30P0CW71 290 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 FSTP19883 344 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 GALP22466 123 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 SRP9P49458 86 aaKnown RBP11.96□□□□□ -0.49
VPS25-201ENST00000253794 GP2P55259 537 aaKnown RBP11.96□□□□□ -0.49
VPS25-201ENST00000253794 TNFAIP6P98066 277 aaPredicted RBP11.96□□□□□ -0.49
VPS25-201ENST00000253794 OR8G1Q15617 311 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 TSTQ16762 297 aaKnown RBP11.96□□□□□ -0.49
VPS25-201ENST00000253794 ASPHD2Q6ICH7 369 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 SERPINA12Q8IW75 414 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 OR5A2Q8NGI9 324 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 OR13C5Q8NGS8 318 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 TSEN15Q8WW01 171 aaKnown RBP11.96□□□□□ -0.49
VPS25-201ENST00000253794 PIGCQ92535 297 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 PHYHIPQ92561 330 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 ERGIC1Q969X5 290 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 TMEM106AQ96A25 262 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 FGGYQ96C11 551 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 MEGF10Q96KG7 1140 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 OR2V2Q96R30 315 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 VRK1Q99986 396 aaPredicted RBP11.96□□□□□ -0.49
VPS25-201ENST00000253794 MRPS26Q9BYN8 205 aaKnown RBP11.96□□□□□ -0.49
VPS25-201ENST00000253794 EGLN1Q9GZT9 426 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 FGF23Q9GZV9 251 aaPredicted RBP11.96□□□□□ -0.49
VPS25-201ENST00000253794 TLNRD1Q9H1K6 362 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 CXXC4Q9H2H0 198 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 TPK1Q9H3S4 243 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 PPP1R3EQ9H7J1 279 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 SAP30LQ9HAJ7 183 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 MYOZ1Q9NP98 299 aaPredicted RBP11.96□□□□□ -0.49
VPS25-201ENST00000253794 USF3Q68DE3 2245 aa11.96□□□□□ -0.49
VPS25-201ENST00000253794 AKAP9Q99996 3911 aa11.96□□□□□ -0.5
VPS25-201ENST00000253794 PNMA8CA0A1B0GUJ8 204 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 OR5B21A6NL26 309 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 TMEM210A6NLX4 147 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 F5H5P2 479 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 HPXP02790 462 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 ZNF20P17024 532 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 TNFRSF1AP19438 455 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 MAPK3P27361 379 aaPredicted RBP11.95□□□□□ -0.5
VPS25-201ENST00000253794 PSMB9P28065 219 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 CRYBB2P43320 205 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 CCL8P80075 99 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 UBE2V2Q15819 145 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 NEDD8Q15843 81 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 ZNF181Q2M3W8 571 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 PRSS57Q6UWY2 283 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 DNM1P46Q6ZS02 220 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 DNAAF1Q8NEP3 725 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 OR5D14Q8NGL3 314 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 Q8TCH9 128 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 SPSB1Q96BD6 273 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 DERL3Q96Q80 235 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 FOXC2Q99958 501 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 MICU1Q9BPX6 476 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 RTL8AQ9BWD3 113 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 C14orf119Q9NWQ9 140 aa11.95□□□□□ -0.5
VPS25-201ENST00000253794 IGKV1-9A0A0C4DH69 117 aa11.94□□□□□ -0.5
VPS25-201ENST00000253794 LOC100289279A0A1B0GTE1 492 aa11.94□□□□□ -0.5
VPS25-201ENST00000253794 PQLC2LA1A4F0 135 aa11.94□□□□□ -0.5
VPS25-201ENST00000253794 H3BSH0 61 aa11.94□□□□□ -0.5
VPS25-201ENST00000253794 IFNL4K9M1U5 179 aa11.94□□□□□ -0.5
VPS25-201ENST00000253794 NDUFS7O75251 213 aa11.94□□□□□ -0.5
VPS25-201ENST00000253794 UCHL1P09936 223 aa11.94□□□□□ -0.5
VPS25-201ENST00000253794 IGFBP3P17936 291 aaPredicted RBP11.94□□□□□ -0.5
VPS25-201ENST00000253794 TGFBR2P37173 567 aa11.94□□□□□ -0.5
VPS25-201ENST00000253794 ATP5J2P56134 94 aa11.94□□□□□ -0.5
VPS25-201ENST00000253794 RPS25P62851 125 aaKnown RBP11.94□□□□□ -0.5
VPS25-201ENST00000253794 GNG3P63215 75 aa11.94□□□□□ -0.5
VPS25-201ENST00000253794 CNN3Q15417 329 aaKnown RBP11.94□□□□□ -0.5
VPS25-201ENST00000253794 ACSM3Q53FZ2 586 aa11.94□□□□□ -0.5
VPS25-201ENST00000253794 SPRNQ5BIV9 151 aa11.94□□□□□ -0.5
VPS25-201ENST00000253794 PLCXD3Q63HM9 321 aa11.94□□□□□ -0.5
VPS25-201ENST00000253794 TMEM91Q6ZNR0 172 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms