RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 TOMM40LQ969M1 308 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 ANKRD9Q96BM1 317 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-227ENST00000640957 NUDT22Q9BRQ3 303 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 EMC6Q9BV81 110 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 SOHLH2Q9NX45 425 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 FBXL21Q9UKT6 434 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 KPTNQ9Y664 436 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 FREM2Q5SZK8 3169 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 ZNF705GA8MUZ8 300 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-227ENST00000640957 CYR61O00622 381 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 IL2RAP01589 272 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 FOLR2P14207 255 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 IGFBP4P22692 258 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 RPS4XP62701 263 aaKnown RBP12.22□□□□□ -0.45
SCARB2-227ENST00000640957 DLX2Q07687 328 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-227ENST00000640957 SHHQ15465 462 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 TMEM128Q5BJH2 165 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 PLXDC2Q6UX71 529 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-227ENST00000640957 BCORP1Q8N888 145 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 EXD3Q8N9H8 876 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 LURAP1Q96LR2 239 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 HS3ST3B1Q9Y662 390 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 AK1P00568 194 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 CD1AP06126 327 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 AMY2BP19961 511 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 CXCR1P25024 350 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 NTSR1P30989 418 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 RPS15AP62244 130 aaKnown RBP12.22□□□□□ -0.45
SCARB2-227ENST00000640957 KHDC3LQ587J8 217 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 FAM166AQ6J272 317 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 SLC18B1Q6NT16 456 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 BRICD5Q6PL45 260 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 BATF2Q8N1L9 274 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 WFIKKN1Q96NZ8 548 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 GPER1Q99527 375 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 CNTNAP3Q9BZ76 1288 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 ZNF700Q9H0M5 742 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 EHFQ9NZC4 300 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 NPIPB9F8W1W9 429 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 NKX2-2O95096 273 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 TAGLN2P37802 199 aaKnown RBP12.21□□□□□ -0.45
SCARB2-227ENST00000640957 INSM1Q01101 510 aaPredicted RBP12.21□□□□□ -0.45
SCARB2-227ENST00000640957 NHLH2Q02577 135 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 NKAIN1Q4KMZ8 207 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 SUMF1Q8NBK3 374 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 ARHGAP5-AS1Q96IT6 56 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 WDR92Q96MX6 357 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 HSF4Q9ULV5 492 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 HHLA2Q9UM44 414 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 B3GALT1Q9Y5Z6 326 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 ABCA7Q8IZY2 2146 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 IFNL4K9M1U5 179 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 PHYHO14832 338 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 CELA2BP08218 269 aaPredicted RBP12.21□□□□□ -0.45
SCARB2-227ENST00000640957 CD37P11049 281 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 ZNF708P17019 499 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 LSM6P62312 80 aaKnown RBP12.21□□□□□ -0.45
SCARB2-227ENST00000640957 CSNK2A1P68400 391 aaPredicted RBP12.21□□□□□ -0.45
SCARB2-227ENST00000640957 PLAC9Q5JTB6 97 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 RPUSD3Q6P087 351 aaKnown RBP12.21□□□□□ -0.45
SCARB2-227ENST00000640957 FBXO46Q6PJ61 603 aaPredicted RBP12.21□□□□□ -0.45
SCARB2-227ENST00000640957 CSNK2A3Q8NEV1 391 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 FAM71F1Q96KD3 344 aaPredicted RBP12.21□□□□□ -0.45
SCARB2-227ENST00000640957 ZFYVE21Q9BQ24 234 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 TIMM29Q9BSF4 260 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 TPSD1Q9BZJ3 242 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 EGLN1Q9GZT9 426 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 Q9N2J8 555 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 RHBDD3Q9Y3P4 386 aa12.21□□□□□ -0.45
SCARB2-227ENST00000640957 DIDO1Q9BTC0 2240 aaKnown RBP12.21□□□□□ -0.46
SCARB2-227ENST00000640957 COL6A3P12111 3177 aa12.21□□□□□ -0.46
SCARB2-227ENST00000640957 CRTAPO75718 401 aaPredicted RBP12.21□□□□□ -0.46
SCARB2-227ENST00000640957 COL9A1P20849 921 aa12.21□□□□□ -0.46
SCARB2-227ENST00000640957 PLA2G5P39877 138 aa12.21□□□□□ -0.46
SCARB2-227ENST00000640957 SOHLH1Q5JUK2 328 aa12.21□□□□□ -0.46
SCARB2-227ENST00000640957 EEF1A1P5Q5VTE0 462 aa12.21□□□□□ -0.46
SCARB2-227ENST00000640957 WDFY1Q8IWB7 410 aa12.21□□□□□ -0.46
SCARB2-227ENST00000640957 ZFP62Q8NB50 900 aaPredicted RBP12.21□□□□□ -0.46
SCARB2-227ENST00000640957 OR56B1Q8NGI3 324 aa12.21□□□□□ -0.46
SCARB2-227ENST00000640957 AQP3Q92482 292 aa12.21□□□□□ -0.46
SCARB2-227ENST00000640957 MRPL24Q96A35 216 aaKnown RBP12.21□□□□□ -0.46
SCARB2-227ENST00000640957 STACQ99469 402 aa12.21□□□□□ -0.46
SCARB2-227ENST00000640957 HDHD3Q9BSH5 251 aaPredicted RBP12.21□□□□□ -0.46
SCARB2-227ENST00000640957 FAM60AQ9NP50 221 aa12.21□□□□□ -0.46
SCARB2-227ENST00000640957 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.21□□□□□ -0.46
SCARB2-227ENST00000640957 ZDBF2Q9HCK1 2354 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 ZNF878C9JN71 531 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 CYTIPO60759 359 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 SCAF4O95104 1147 aaKnown RBP12.2□□□□□ -0.46
SCARB2-227ENST00000640957 CT45A8P0DMV1 189 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 CT45A9P0DMV2 189 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 DDTP30046 118 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 OR3A4PP47883 348 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 SULT1A2P50226 295 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 CT45A2Q5DJT8 189 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 GLIPR1L1Q6UWM5 242 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 ZNF574Q6ZN55 896 aaPredicted RBP12.2□□□□□ -0.46
SCARB2-227ENST00000640957 Q6ZSR6 202 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 Q8WTZ3 238 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms