RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 PGAM5Q96HS1 289 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 PKP2Q99959 881 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 RBM4BQ9BQ04 359 aaKnown RBP11.3□□□□□ -0.6
HDAC5-208ENST00000588419 DPAGT1Q9H3H5 408 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 MED20Q9H944 212 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 MED4Q9NPJ6 270 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 U3KQV3 271 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 NKX6-3A6NJ46 265 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 FAM183AA6NL82 134 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 RIIAD1A6NNX1 92 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 KRT36O76013 467 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 TSPAN15O95858 294 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 IFNGP01579 166 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 TFF1P04155 84 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 ZNF3P17036 446 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 ATP6V1B2P21281 511 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 SLC15A1P46059 708 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 ZNF121P58317 390 aaPredicted RBP11.29□□□□□ -0.6
HDAC5-208ENST00000588419 FAM3AP98173 230 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 C16orf89Q6UX73 402 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 WDR82Q6UXN9 313 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 GDPGP1Q6ZNW5 385 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 CPLX4Q7Z7G2 160 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 LDLRAD3Q86YD5 345 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 CMTM4Q8IZR5 234 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 PNKDQ8N490 385 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 OR2T33Q8NG76 320 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 LINC01006Q8NI28 216 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 FAM110DQ8TAY7 271 aaPredicted RBP11.29□□□□□ -0.6
HDAC5-208ENST00000588419 LRTOMTQ8WZ04 291 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 INTS14Q96SY0 518 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 DDOQ99489 341 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 ARL8BQ9NVJ2 186 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 CD300AQ9UGN4 299 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 TAGLN3Q9UI15 199 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 CAB39Q9Y376 341 aaPredicted RBP11.29□□□□□ -0.6
HDAC5-208ENST00000588419 KPTNQ9Y664 436 aa11.29□□□□□ -0.6
HDAC5-208ENST00000588419 hCG_38984A0A1B0GV85 526 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 ANXA2P2A6NMY6 339 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 CDIPTO14735 213 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 PAHP00439 452 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 LHBP01229 141 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 FBP1P09467 338 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 H2BFMP0C1H6 154 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 MUC1P15941 1255 aaPredicted RBP11.28□□□□□ -0.6
HDAC5-208ENST00000588419 EEF1B2P24534 225 aaKnown RBP11.28□□□□□ -0.6
HDAC5-208ENST00000588419 DDOSTP39656 456 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 NAA10P41227 235 aaPredicted RBP11.28□□□□□ -0.6
HDAC5-208ENST00000588419 GSK3AP49840 483 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 RPL15P61313 204 aaKnown RBP11.28□□□□□ -0.6
HDAC5-208ENST00000588419 TAF9Q16594 264 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 LRRC10Q5BKY1 277 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 ASPHD2Q6ICH7 369 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 Q6ZSV7 163 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 RHOUQ7L0Q8 258 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 C11orf53Q8IXP5 236 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 LINC00471Q8N535 108 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 IQCF1Q8N6M8 205 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 TEX47Q8TBZ9 253 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 RPL3LQ92901 407 aaKnown RBP11.28□□□□□ -0.6
HDAC5-208ENST00000588419 SPSB4Q96A44 273 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 SGK3Q96BR1 496 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 MICU1Q9BPX6 476 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 OR10A2Q9H208 303 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 TOR3AQ9H497 397 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 REEP1Q9H902 201 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 RNPEPL1Q9HAU8 725 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 VNN3Q9NY84 501 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 TAS2R1Q9NYW7 299 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 IL20Q9NYY1 176 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 ZNRD1Q9P1U0 126 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 KAAG1Q9UBP8 84 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 ZNF391Q9UJN7 358 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 PRPF19Q9UMS4 504 aaKnown RBP11.28□□□□□ -0.6
HDAC5-208ENST00000588419 BAIAP2Q9UQB8 552 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 RHBDD3Q9Y3P4 386 aa11.28□□□□□ -0.6
HDAC5-208ENST00000588419 SAMHD1Q9Y3Z3 626 aaKnown RBP11.28□□□□□ -0.6
HDAC5-208ENST00000588419 A0A1W2PQ09 198 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 ANKRD61A6NGH8 418 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 ZNF850A8MQ14 1090 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 H3BN98 237 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 NPFFO15130 113 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 SNX3O60493 162 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 TIPRLO75663 272 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 NDUFB7P17568 137 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 POU1F1P28069 291 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 SLC25A1P53007 311 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 AMELYQ99218 206 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 ABHD6Q9BV23 337 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 RTL8AQ9BWD3 113 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 WDR13Q9H1Z4 485 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 OR51V1Q9H2C8 321 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 SP140LQ9H930 580 aa11.27□□□□□ -0.61
HDAC5-208ENST00000588419 MEIOCA2RUB1 952 aa11.26□□□□□ -0.61
HDAC5-208ENST00000588419 SLC22A31A6NKX4 558 aa11.26□□□□□ -0.61
HDAC5-208ENST00000588419 RNASEK-C17orf49H0YIS7 233 aa11.26□□□□□ -0.61
HDAC5-208ENST00000588419 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.26□□□□□ -0.61
HDAC5-208ENST00000588419 AKR7A2O43488 359 aa11.26□□□□□ -0.61
HDAC5-208ENST00000588419 CFL1P23528 166 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms