RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ZNF584Q8IVC4 421 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 LINC00346Q8IVM7 164 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF679Q8IYX0 411 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF540Q8NDQ6 660 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 SLC30A7Q8NEW0 376 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 BPIFB6Q8NFQ5 453 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 OR10H4Q8NGA5 316 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 OR4F15Q8NGB8 312 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 OR52I1Q8NGK6 324 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 OR10S1Q8NGN2 331 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 OR52N1Q8NH53 320 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 FGFBP3Q8TAT2 258 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 SCARB1Q8WTV0 552 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 THEM6Q8WUY1 208 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 HTRA1Q92743 480 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 GGHQ92820 318 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 SLAMF6Q96DU3 332 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 POM121L2Q96KW2 1035 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 COG8Q96MW5 612 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 OR8B4Q96RC9 309 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 NR1H4Q96RI1 486 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-213ENST00000550629 SIGLEC11Q96RL6 698 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 COPS4Q9BT78 406 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 MROQ9BYG7 248 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 NOX3Q9HBY0 568 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 AMBNQ9NP70 447 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 PNRC2Q9NPJ4 139 aaKnown RBP4.94□□□□□ -1.62
SCAF11-213ENST00000550629 CHCHD3Q9NX63 227 aaKnown RBP4.94□□□□□ -1.62
SCAF11-213ENST00000550629 EIF3KQ9UBQ5 218 aaKnown RBP4.94□□□□□ -1.62
SCAF11-213ENST00000550629 AASSQ9UDR5 926 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 KLHDC2Q9Y2U9 406 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 EXOSC1Q9Y3B2 195 aaKnown RBP4.94□□□□□ -1.62
SCAF11-213ENST00000550629 INTS1Q8N201 2190 aaKnown RBP4.94□□□□□ -1.62
SCAF11-213ENST00000550629 CENPEQ02224 2701 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 LOC100509620A0A075B734 347 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 IGHV2OR16-5A0A0B4J2B6 119 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 IGHV1-18A0A0C4DH31 117 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 LOC102723971A0A1B0GUV8 181 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 C5orf49A4QMS7 147 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 METTL15A6NJ78 407 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 VSTM5A8MXK1 200 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 DEFB108AA8MXU0 73 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 PTGES3LE9PB15 166 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 C19orf84I3L1E1 186 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 M0R1B8 84 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 PSMD9O00233 223 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 RGS10O43665 173 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 XPNPEP2O43895 674 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 CLDN1O95832 211 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 MT-ND5P03915 603 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 H2BFMP0C1H6 154 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 PATE4P0C8F1 98 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 LIMS3P0CW19 117 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 LIMS4P0CW20 117 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 PSKH1P11801 424 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 COX6B1P14854 86 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 RAD52P43351 418 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 HTR5AP47898 357 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 IDH3GP51553 393 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-213ENST00000550629 RIDAP52758 137 aaKnown RBP4.93□□□□□ -1.62
SCAF11-213ENST00000550629 RPS16P62249 146 aaKnown RBP4.93□□□□□ -1.62
SCAF11-213ENST00000550629 RPS23P62266 143 aaKnown RBP4.93□□□□□ -1.62
SCAF11-213ENST00000550629 TUBA1BP68363 451 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 NAAAQ02083 359 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF85Q03923 595 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 BSPH1Q075Z2 132 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 TAF13Q15543 124 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 RSPO1Q2MKA7 263 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF829Q3KNS6 432 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-213ENST00000550629 CCDC58Q4VC31 144 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 NCMAPQ5T1S8 102 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 ADAM5Q6NVV9 412 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF544Q6NX49 715 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 COLCA1Q6ZS62 124 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 AHSA2Q719I0 299 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 TUBA1AQ71U36 451 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 FAM220AQ7Z4H9 259 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 KRT77Q7Z794 578 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-213ENST00000550629 STX19Q8N4C7 294 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 NUP37Q8NFH4 326 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 OR52H1Q8NGJ2 320 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 AKR7LQ8NHP1 331 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 APOBEC3DQ96AK3 386 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-213ENST00000550629 AMELYQ99218 206 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 DOK1Q99704 481 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 KCNS3Q9BQ31 491 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF649Q9BS31 505 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 TMEM204Q9BSN7 226 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 MND1Q9BWT6 205 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 C1QTNF5Q9BXJ0 243 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 RGCCQ9H4X1 137 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF696Q9H7X3 374 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 MOB1AQ9H8S9 216 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 ELOVL3Q9HB03 270 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 CDH20Q9HBT6 801 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 SLCO1C1Q9NYB5 712 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 NPAP1Q9NZP6 1156 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 MRM2Q9UI43 246 aaKnown RBP4.93□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF391Q9UJN7 358 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms