RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 BIVMQ86UB2 503 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 ZNF679Q8IYX0 411 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 OR10H5Q8NGA6 315 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 DEFB127Q9H1M4 99 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 KCNK15Q9H427 330 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 LIPGQ9Y5X9 500 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 NCOA6Q14686 2063 aaPredicted RBP13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 TRAV18A0A075B6X5 111 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 GGT3PA6NGU5 568 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 ZNF891A8MT65 544 aaPredicted RBP13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 TLX3O43711 291 aaPredicted RBP13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 AKAIN1P0CW23 69 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 CSNK1A1P48729 337 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 B2MP61769 119 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 C3AR1Q16581 482 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 HIST3H3Q16695 136 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 RNFT1Q5M7Z0 435 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 ZNF546Q86UE3 836 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 BPIFCQ8NFQ6 507 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 OR51A4Q8NGJ6 313 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 OR52N5Q8NH56 324 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 ABHD3Q8WU67 409 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 ASB17Q8WXJ9 295 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 PPP1R14AQ96A00 147 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 SLC25A28Q96A46 364 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 TAS2R8Q9NYW2 309 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 STEAP1Q9UHE8 339 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 LRP12Q9Y561 859 aa13.45□□□□□ -0.26
CLPTM1-202ENST00000541297 TRBV5-5A0A0J9YX44 114 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 CTAG2O75638 210 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 NTF4P34130 210 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 PDSS1Q5T2R2 415 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 ANKRD16Q6P6B7 361 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 KCTD18Q6PI47 426 aaPredicted RBP13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 SLC25A47Q6Q0C1 308 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 PRSS35Q8N3Z0 413 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 ZFP62Q8NB50 900 aaPredicted RBP13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 OR2G2Q8NGZ5 317 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 WDR13Q9H1Z4 485 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 POFUT1Q9H488 388 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 BARX1Q9HBU1 254 aaPredicted RBP13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 CENPMQ9NSP4 180 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 RASL12Q9NYN1 266 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 ZNF175Q9Y473 711 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 DOK2O60496 412 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 MGMTP16455 207 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 CLDN18P56856 261 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 LY6G6FQ5SQ64 297 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 BOLLQ8N9W6 283 aaKnown RBP13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 ST7LQ8TDW4 575 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 TMEM106AQ96A25 262 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 NKX6-2Q9C056 277 aaPredicted RBP13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 POLR1DQ9Y2S0 133 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 PRELID3BQ9Y3B1 194 aa13.44□□□□□ -0.26
CLPTM1-202ENST00000541297 MPTX1A8MV57 137 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 ABCD4O14678 606 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 DNPH1O43598 174 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 ZNF254O75437 659 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 PNPP00491 289 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 HYAL4Q2M3T9 481 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 PABPC1L2AQ5JQF8 200 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 TMEM178AQ8NBL3 297 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 NARS2Q96I59 477 aaKnown RBP13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 FLVCR1Q9Y5Y0 555 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 ZNF716A6NP11 495 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 ZNF432O94892 652 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 UBBP0CG47 229 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 UBCP0CG48 685 aaKnown RBP13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 RIDAP52758 137 aaKnown RBP13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 RPS27AP62979 156 aaKnown RBP13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 UBA52P62987 128 aaKnown RBP13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 MFGE8Q08431 387 aaPredicted RBP13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 WDR38Q5JTN6 314 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 TMEM123Q8N131 208 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 LINC00469Q8N7U9 141 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 CPNE4Q96A23 557 aaPredicted RBP13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 NKX3-1Q99801 234 aaPredicted RBP13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 RBM24Q9BX46 236 aaKnown RBP13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 CYB5R1Q9UHQ9 305 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 SLC22A13Q9Y226 551 aa13.43□□□□□ -0.26
CLPTM1-202ENST00000541297 KIR3DL2P43630 455 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 FLI1Q01543 452 aaPredicted RBP13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 ROM1Q03395 351 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 RASGEF1BQ0VAM2 473 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 SLC10A1Q14973 349 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 PCK2Q16822 640 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 STEAP1BQ6NZ63 245 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 MOB3CQ70IA8 216 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 TMED4Q7Z7H5 227 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 ZNF676Q8N7Q3 588 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 ZNF837Q96EG3 531 aaPredicted RBP13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 SF3B5Q9BWJ5 86 aaKnown RBP13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 DNTTIP1Q9H147 329 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 LHFPL6Q9Y693 200 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 FREM1Q5H8C1 2179 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 A0A1B0GW55 424 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 OR4E1P0C645 316 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 DUX4L2P0CJ85 424 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 DUX4L3P0CJ86 424 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 230 ms