RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	FOXF1	Q12946	379 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	RBM39	Q14498	530 aa	Known RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	UBE2V2	Q15819	145 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	RNASE10	Q5GAN6	216 aa	Known RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	AWAT2	Q6E213	333 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	UNQ6126/PRO20091	Q6UXV3	157 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	ZNF574	Q6ZN55	896 aa	Predicted RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	ANKRD37	Q7Z713	158 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	SKA3	Q8IX90	412 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	TMEM123	Q8N131	208 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	SVBP	Q8N300	66 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	WDSUB1	Q8N9V3	476 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897		Q8NFD4	153 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	OR6X1	Q8NH79	312 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	WFDC1	Q9HC57	220 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	PNO1	Q9NRX1	252 aa	Known RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	TAS2R3	Q9NYW6	316 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	MYEF2	Q9P2K5	600 aa	Known RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	CKLF	Q9UBR5	152 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	TCFL5	Q9UL49	500 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	POMT1	Q9Y6A1	747 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	PHOX2A	O14813	284 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	CD2	P06729	351 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	ACAA1	P09110	424 aa	Predicted RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	ZNF44	P15621	663 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	PTGFR	P43088	359 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	KCNJ3	P48549	501 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	FBXW4	P57775	412 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	FOXL2	P58012	376 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	RNPS1	Q15287	305 aa	Known RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	C14orf28	Q4W4Y0	310 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	TMEM42	Q69YG0	159 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	WDR74	Q6RFH5	385 aa	Predicted RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	C16orf47	Q6ZP98	133 aa	Predicted RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	SLC29A4	Q7RTT9	530 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	SULF2	Q8IWU5	870 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	SPAG16	Q8N0X2	631 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	RNF141	Q8WVD5	230 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	DACT3	Q96B18	629 aa	Predicted RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	BSCL2	Q96G97	398 aa	Predicted RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	NARS2	Q96I59	477 aa	Known RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	ARHGAP5-AS1	Q96IT6	56 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	OR8D2	Q9GZM6	311 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	PRR13	Q9NZ81	148 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	DHCR7	Q9UBM7	475 aa	Known RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	IGKV1-27	A0A075B6S5	117 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	FBXO24	O75426	580 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	SPP1	P10451	314 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	TPT1	P13693	172 aa	Known RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	NFYB	P25208	207 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	ZNF93	P35789	620 aa	Predicted RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	CBX5	P45973	191 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	S100A12	P80511	92 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	ACY1	Q03154	408 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	MYBPH	Q13203	477 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	TAF13	Q15543	124 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	LURAP1L	Q8IV03	231 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	OR2M3	Q8NG83	312 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	OR4K15	Q8NH41	348 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	OR51E1	Q8TCB6	317 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	DNAJA3	Q96EY1	480 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897		Q96M66	194 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	GINS3	Q9BRX5	216 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	PECR	Q9BY49	303 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	NKX2-4	Q9H2Z4	354 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	ZNF581	Q9P0T4	197 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	FARSA	Q9Y285	508 aa	Known RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	NOP16	Q9Y3C1	178 aa	Known RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	ZFHX4	Q86UP3	3567 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897		A0A1B0GX78	115 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	AQP7P3	A6NL99	342 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	METTL12	A8MUP2	240 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	ZNF878	C9JN71	531 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	TSPAN9	O75954	239 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	TIAF1	O95411	115 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	IGHG1	P01857	330 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	CRYBA1	P05813	215 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	PPM1F	P49593	454 aa	Predicted RBP	3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	CCR4	P51679	360 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	FAM3A	P98173	230 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	RAB32	Q13637	225 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	RNF212	Q495C1	297 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	OR2A2	Q6IF42	318 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	TMEM88	Q6PEY1	159 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	MYO7B	Q6PIF6	2116 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	RAB11FIP2	Q7L804	512 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	KMT5C	Q86Y97	462 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	C10orf53	Q8N6V4	93 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	UBAC2	Q8NBM4	344 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	OR5D14	Q8NGL3	314 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	GALNT14	Q96FL9	552 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	MRGPRX4	Q96LA9	322 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	C2orf50	Q96LR7	162 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	CNTNAP3B	Q96NU0	1288 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	GNRHR2	Q96P88	292 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	SYT3	Q9BQG1	590 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	CNTNAP3	Q9BZ76	1288 aa		3.86	□□□□□ -1.79
CTSC-208	ENST00000533897	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms