RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 CDK5Q00535 292 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 SYCNQ0VAF6 134 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 DYNC1I2Q13409 638 aaKnown RBP3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 DEFB116Q30KQ4 102 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 TFDP3Q5H9I0 405 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 FAM27D1Q5T7N8 215 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 CLEC6AQ6EIG7 209 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 FAHD1Q6P587 224 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 IGFL2Q6UWQ7 119 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 CALHM1Q8IU99 346 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 SAXO1Q8IYX7 474 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 OR5W2Q8NH69 310 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 RXFP4Q8TDU9 374 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 PDXPQ96GD0 296 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 NARS2Q96I59 477 aaKnown RBP3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 KCNS1Q96KK3 526 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 NAPGQ99747 312 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 ACBD6Q9BR61 282 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 UTP23Q9BRU9 249 aaKnown RBP3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 CHMP5Q9NZZ3 219 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 SIGLEC7Q9Y286 467 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 GMEB1Q9Y692 573 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 TMEM14AQ9Y6G1 99 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 BRCA1P38398 1863 aaKnown RBP3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 TRAV8-7A0A075B6U6 113 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 TMX2-CTNND1H3BSU7 103 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 K7EN84 100 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 CD9P21926 228 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 TALDO1P37837 337 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 PRLHRP49683 370 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 ERFP50548 548 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 IFITM3Q01628 133 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 MECOMQ03112 1051 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 DMTNQ08495 405 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 SIGLEC14Q08ET2 396 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 RBMY1FQ15415 496 aaKnown RBP3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 TOMM34Q15785 309 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 TMEM236Q5W0B7 351 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 Q5W150 140 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 EPGNQ6UW88 154 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 WDR86Q86TI4 376 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 TMEM239Q8WW34 195 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 RXFP2Q8WXD0 754 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 ZNF414Q96IQ9 312 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 SFXN3Q9BWM7 321 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 TREM1Q9NP99 234 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 RBFOX1Q9NWB1 397 aaKnown RBP3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 CLEC2DQ9UHP7 191 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 PSG11Q9UQ72 335 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 PTPRTO14522 1441 aa3.44□□□□□ -1.86
HMGB1P47-201ENST00000511281 NACAE9PAV3 2078 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 TRAV19A0A0A6YYK7 116 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 IGHV3-72A0A0B4J1Y9 119 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 TMEM223A0PJW6 202 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 IQCF5A8MTL0 148 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 M0R1B8 84 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 APCSP02743 223 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 PGAM1P18669 254 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 IFFO1Q0D2I5 559 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 XRCC4Q13426 336 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 MPV17L2Q567V2 206 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 FAM78AQ5JUQ0 283 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 ACTL10Q5JWF8 245 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 KDM4DQ6B0I6 523 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 SH2D6Q7Z4S9 175 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 SETD3Q86TU7 594 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 SLC7A5P1Q8MH63 180 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 PGAM4Q8N0Y7 254 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 FLYWCH2Q96CP2 140 aaKnown RBP3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 PRORYQ9H606 182 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 WDR55Q9H6Y2 383 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 C6orf50Q9HD87 102 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 HEBP1Q9NRV9 189 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 NECAP2Q9NVZ3 263 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 SLC7A11Q9UPY5 501 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 POFUT2Q9Y2G5 429 aa3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 COL16A1Q07092 1604 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P47-201ENST00000511281 TRAV8-4A0A0B4J246 113 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 A0A1W2PP18 115 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 MGAT4DA6NG13 374 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 TVP23AA6NH52 213 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 H0YJW9 148 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 SPAG7O75391 227 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 FADS2O95864 444 aaKnown RBP3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 PTTG1O95997 202 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 P01737 135 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 IGHV3-11P01762 117 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 RPN2P04844 631 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 MAGP20916 626 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 GALR1P47211 349 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 C2orf80Q0P641 193 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 INCA1Q0VD86 236 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 C16orf72Q14CZ0 275 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 SMUG1Q53HV7 270 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 Q6P435 159 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 Q6ZR03 302 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 Q6ZVH6 145 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 BHLHA15Q7RTS1 189 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 FAM19A1Q7Z5A9 133 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms