RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 PLPP7Q8NBV4 271 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 WFDC12Q8WWY7 111 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 REEP6Q96HR9 211 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 FAM71F1Q96KD3 344 aaPredicted RBP9.04□□□□□ -0.96
RNF4-212ENST00000509258 LRGUKQ96M69 825 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 TECTBQ96PL2 329 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 MMADHCQ9H3L0 296 aaPredicted RBP9.04□□□□□ -0.96
RNF4-212ENST00000509258 OPA3Q9H6K4 179 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 BEX1Q9HBH7 125 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 MRPL15Q9P015 296 aaKnown RBP9.04□□□□□ -0.96
RNF4-212ENST00000509258 RNF7Q9UBF6 113 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 TRAV38-1A0A0B4J264 116 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 CCDC182A6NF36 153 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 SRRM5B3KS81 715 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 M0R129 80 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 LGALS8O00214 317 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 HOXA3O43365 443 aaPredicted RBP9.03□□□□□ -0.96
RNF4-212ENST00000509258 GMDSO60547 372 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 FKBP6O75344 327 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 ANXA2P07355 339 aaKnown RBP9.03□□□□□ -0.96
RNF4-212ENST00000509258 SELLP14151 372 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 AMY2BP19961 511 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 OMGP23515 440 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 NAA10P41227 235 aaPredicted RBP9.03□□□□□ -0.96
RNF4-212ENST00000509258 GSK3AP49840 483 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 RPL15P61313 204 aaKnown RBP9.03□□□□□ -0.96
RNF4-212ENST00000509258 FGF12P61328 243 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 CDK5Q00535 292 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 TAF13Q15543 124 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 C11orf91Q3C1V1 193 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 CPOQ8IVL8 374 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 PNLDC1Q8NA58 520 aaKnown RBP9.03□□□□□ -0.96
RNF4-212ENST00000509258 TBX15Q96SF7 602 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 POMPQ9Y244 141 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 RHBDD3Q9Y3P4 386 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 VWFP04275 2813 aa9.03□□□□□ -0.96
RNF4-212ENST00000509258 FAM181BA6NEQ2 426 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 A6NLC8 198 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 PSMD9O00233 223 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 DYNC1I1O14576 645 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 TIMM23O14925 209 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 ADAM20O43506 726 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 XRCC2O43543 280 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 MITFO75030 526 aaPredicted RBP9.02□□□□□ -0.97
RNF4-212ENST00000509258 OSMP13725 252 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 MMP9P14780 707 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 EPHA2P29317 976 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 DAPP51397 102 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 RAG2P55895 527 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 DLX1P56177 255 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 GRB2P62993 217 aaKnown RBP9.02□□□□□ -0.97
RNF4-212ENST00000509258 CBX1P83916 185 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 PRB3Q04118 309 aaPredicted RBP9.02□□□□□ -0.97
RNF4-212ENST00000509258 FLOT2Q14254 428 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 PDCD1Q15116 288 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 OR8B8Q15620 311 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 TIGD6Q17RP2 521 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 DEFB112Q30KQ8 113 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 GFOD2Q3B7J2 385 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 DMRTC1Q5HYR2 192 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 METTL11BQ5VVY1 283 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 WDR82Q6UXN9 313 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 BCDIN3DQ7Z5W3 292 aaKnown RBP9.02□□□□□ -0.97
RNF4-212ENST00000509258 SPATA24Q86W54 205 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 PAPD5Q8NDF8 572 aaKnown RBP9.02□□□□□ -0.97
RNF4-212ENST00000509258 OR8B12Q8NGG6 310 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 OTOSQ8NHW6 89 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 TBC1D15Q8TC07 691 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 GATAD2BQ8WXI9 593 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 UTP4Q969X6 686 aaKnown RBP9.02□□□□□ -0.97
RNF4-212ENST00000509258 PPP1R14AQ96A00 147 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 PCGF1Q9BSM1 259 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 CADM1Q9BY67 442 aaKnown RBP9.02□□□□□ -0.97
RNF4-212ENST00000509258 TTTY10Q9BZA0 68 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 PRDM13Q9H4Q3 707 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 SP140LQ9H930 580 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 C14orf119Q9NWQ9 140 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 CAB39Q9Y376 341 aaPredicted RBP9.02□□□□□ -0.97
RNF4-212ENST00000509258 POMT1Q9Y6A1 747 aa9.02□□□□□ -0.97
RNF4-212ENST00000509258 A0A0G2JK05 382 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 hCG_1807616A0A1W2PRN6 198 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 OOEPA6NGQ2 149 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 ZNF879B4DU55 563 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 PRR23D1E9PI22 279 aaPredicted RBP9.01□□□□□ -0.97
RNF4-212ENST00000509258 TIPRLO75663 272 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 TOX4O94842 621 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 ECDO95905 644 aaPredicted RBP9.01□□□□□ -0.97
RNF4-212ENST00000509258 MRPL3P09001 348 aaKnown RBP9.01□□□□□ -0.97
RNF4-212ENST00000509258 PRR23D2P0DMB1 279 aaPredicted RBP9.01□□□□□ -0.97
RNF4-212ENST00000509258 HSD11B1P28845 292 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 CFHR2P36980 270 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 DDOSTP39656 456 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 SNCBQ16143 134 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 TEX36Q5VZQ5 186 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 FAHD1Q6P587 224 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 BRICD5Q6PL45 260 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 OR1M1Q8NGA1 313 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 BCAS4Q8TDM0 211 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 THEM6Q8WUY1 208 aa9.01□□□□□ -0.97
RNF4-212ENST00000509258 LRRC29Q8WV35 223 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms