RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 PFDN1O60925 122 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 MTRF1O75570 445 aaKnown RBP10.01□□□□□ -0.81
VPS52-213ENST00000461743 CST4P01036 141 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 IGHV2-70P01814 119 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 ZNF16P17020 682 aaPredicted RBP10.01□□□□□ -0.81
VPS52-213ENST00000461743 PCMT1P22061 227 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 CA6P23280 308 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 GNALP38405 381 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 MAP2K3P46734 347 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 CDH15P55291 814 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 ISL1P61371 349 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 IL5RAQ01344 420 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 LRRC36Q1X8D7 754 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 GFOD2Q3B7J2 385 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 CDONQ4KMG0 1287 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 TMEM155Q4W5P6 130 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 FAM166AQ6J272 317 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 SSX6Q7RTT6 188 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 ELMOD2Q8IZ81 293 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 GALNT4Q8N4A0 578 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 DHRSXQ8N5I4 330 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 SPICQ8N5J4 248 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 YIPF7Q8N8F6 280 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 OR11L1Q8NGX0 322 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 HAVCR2Q8TDQ0 301 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 SIGLEC11Q96RL6 698 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 ADI1Q9BV57 179 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 PAPOLGQ9BWT3 736 aaKnown RBP10.01□□□□□ -0.81
VPS52-213ENST00000461743 TTTY10Q9BZA0 68 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 ZNF696Q9H7X3 374 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 FN3KRPQ9HA64 309 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 MRPS18AQ9NVS2 196 aaKnown RBP10.01□□□□□ -0.81
VPS52-213ENST00000461743 ZNF319Q9P2F9 582 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 BLOC1S6Q9UL45 172 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 RPL36Q9Y3U8 105 aaKnown RBP10.01□□□□□ -0.81
VPS52-213ENST00000461743 CACNG2Q9Y698 323 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 ZNF816-ZNF321PA0A0X1KG74 233 aa10□□□□□ -0.81
VPS52-213ENST00000461743 TMEM210A6NLX4 147 aa10□□□□□ -0.81
VPS52-213ENST00000461743 ANXA2P2A6NMY6 339 aa10□□□□□ -0.81
VPS52-213ENST00000461743 A8MV72 311 aaPredicted RBP10□□□□□ -0.81
VPS52-213ENST00000461743 B4DSR2 109 aa10□□□□□ -0.81
VPS52-213ENST00000461743 H0YJX3 145 aa10□□□□□ -0.81
VPS52-213ENST00000461743 TMEM178BH3BS89 294 aa10□□□□□ -0.81
VPS52-213ENST00000461743 PSMD9O00233 223 aa10□□□□□ -0.81
VPS52-213ENST00000461743 DENRO43583 198 aaKnown RBP10□□□□□ -0.81
VPS52-213ENST00000461743 DHRS3O75911 302 aa10□□□□□ -0.81
VPS52-213ENST00000461743 APOL3O95236 402 aa10□□□□□ -0.81
VPS52-213ENST00000461743 FADS2O95864 444 aaKnown RBP10□□□□□ -0.81
VPS52-213ENST00000461743 IGHA1P01876 353 aa10□□□□□ -0.81
VPS52-213ENST00000461743 TTRP02766 147 aa10□□□□□ -0.81
VPS52-213ENST00000461743 HLA-DPB1P04440 258 aa10□□□□□ -0.81
VPS52-213ENST00000461743 IRF2P14316 349 aa10□□□□□ -0.81
VPS52-213ENST00000461743 CCL1P22362 96 aa10□□□□□ -0.81
VPS52-213ENST00000461743 CAPGP40121 348 aa10□□□□□ -0.81
VPS52-213ENST00000461743 MDH2P40926 338 aaKnown RBP10□□□□□ -0.81
VPS52-213ENST00000461743 PRSS12P56730 875 aa10□□□□□ -0.81
VPS52-213ENST00000461743 BTG1P62324 171 aa10□□□□□ -0.81
VPS52-213ENST00000461743 ADARB1P78563 741 aaKnown RBP10□□□□□ -0.81
VPS52-213ENST00000461743 ZNF85Q03923 595 aa10□□□□□ -0.81
VPS52-213ENST00000461743 MFGE8Q08431 387 aaPredicted RBP10□□□□□ -0.81
VPS52-213ENST00000461743 MRPL28Q13084 256 aaKnown RBP10□□□□□ -0.81
VPS52-213ENST00000461743 MAB21L1Q13394 359 aa10□□□□□ -0.81
VPS52-213ENST00000461743 DCTN2Q13561 401 aaKnown RBP10□□□□□ -0.81
VPS52-213ENST00000461743 KLHL22Q53GT1 634 aa10□□□□□ -0.81
VPS52-213ENST00000461743 SPRNQ5BIV9 151 aa10□□□□□ -0.81
VPS52-213ENST00000461743 Q6ZSR3 168 aa10□□□□□ -0.81
VPS52-213ENST00000461743 ZNF554Q86TJ5 538 aa10□□□□□ -0.81
VPS52-213ENST00000461743 MOGAT3Q86VF5 341 aa10□□□□□ -0.81
VPS52-213ENST00000461743 CATSPERDQ86XM0 798 aa10□□□□□ -0.81
VPS52-213ENST00000461743 ACBD7Q8N6N7 88 aa10□□□□□ -0.81
VPS52-213ENST00000461743 LINC01356Q8N9X3 169 aa10□□□□□ -0.81
VPS52-213ENST00000461743 OR8S1Q8NH09 359 aa10□□□□□ -0.81
VPS52-213ENST00000461743 APH1BQ8WW43 257 aa10□□□□□ -0.81
VPS52-213ENST00000461743 CYGBQ8WWM9 190 aa10□□□□□ -0.81
VPS52-213ENST00000461743 UBE2FQ969M7 185 aa10□□□□□ -0.81
VPS52-213ENST00000461743 LGALS12Q96DT0 336 aa10□□□□□ -0.81
VPS52-213ENST00000461743 LYZL4Q96KX0 146 aa10□□□□□ -0.81
VPS52-213ENST00000461743 TBX5Q99593 518 aa10□□□□□ -0.81
VPS52-213ENST00000461743 GAL3ST1Q99999 423 aa10□□□□□ -0.81
VPS52-213ENST00000461743 JAM3Q9BX67 310 aa10□□□□□ -0.81
VPS52-213ENST00000461743 RBM38Q9H0Z9 239 aaKnown RBP10□□□□□ -0.81
VPS52-213ENST00000461743 ZNF665Q9H7R5 613 aa10□□□□□ -0.81
VPS52-213ENST00000461743 TRIM36Q9NQ86 728 aa10□□□□□ -0.81
VPS52-213ENST00000461743 G6PC2Q9NQR9 355 aa10□□□□□ -0.81
VPS52-213ENST00000461743 GPR84Q9NQS5 396 aa10□□□□□ -0.81
VPS52-213ENST00000461743 LPAR3Q9UBY5 353 aa10□□□□□ -0.81
VPS52-213ENST00000461743 OR52A1Q9UKL2 312 aa10□□□□□ -0.81
VPS52-213ENST00000461743 KCNS2Q9ULS6 477 aa10□□□□□ -0.81
VPS52-213ENST00000461743 MXRA5Q9NR99 2828 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 DAPL1A0PJW8 107 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 ISPDA4D126 451 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 LRP5LA4QPB2 252 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 IGHV2-5P01817 119 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 UBCP0CG48 685 aaKnown RBP9.99□□□□□ -0.81
VPS52-213ENST00000461743 ACKR3P25106 362 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 HSPA13P48723 471 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 MVKQ03426 396 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 RIPPLY1Q0D2K3 151 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 AVPI1Q5T686 147 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 LIPNQ5VXI9 398 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms