RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 G3V3Q6 166 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 M0QZK8 103 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 MANBAO00462 879 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 MFNGO00587 321 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SCAMP2O15127 329 aaKnown RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SURF4O15260 269 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 RNF13O43567 381 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 GGCTO75223 188 aaKnown RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 NDUFB6O95139 128 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 CLDN9O95484 217 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 PTBP3O95758 552 aaKnown RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 TRBC1P01850 177 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 IGHEP01854 428 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SERPINA5P05154 406 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 EIF4EP06730 217 aaKnown RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 CD3GP09693 182 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 MYOGP15173 224 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 CBR1P16152 277 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 HIST1H1BP16401 226 aaKnown RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 RCC1P18754 421 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SDC1P18827 310 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 TYMPP19971 482 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 PPP2R1BP30154 601 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 CD86P42081 329 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SRP9P49458 86 aaKnown RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 CCR6P51684 374 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 CRIP2P52943 208 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SLC26A5P58743 744 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 TAS2R19P59542 299 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 BPIFB3P59826 476 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 ACTBP60709 375 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SKP1P63208 163 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 ACTG1P63261 375 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 CYCSP99999 105 aaKnown RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 NAAAQ02083 359 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SP4Q02446 784 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 LAMTOR4Q0VGL1 99 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 TCP10Q12799 353 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 MADCAM1Q13477 382 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SERTAD2Q14140 314 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 TMEM187Q14656 261 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 ABRAXAS2Q15018 415 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 RSU1Q15404 277 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZNHIT3Q15649 155 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 HAGHQ16775 308 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 LRRC37A5PQ49AS3 106 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 ACER2Q5QJU3 275 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 MARC1Q5VT66 337 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 GLT8D1Q68CQ7 371 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZNF776Q68DI1 518 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 PTRHD1Q6GMV3 140 aaKnown RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR10K2Q6IF99 312 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SCIMPQ6UWF3 145 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 Q6ZPB1 254 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZNF621Q6ZSS3 439 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SMIM15Q7Z3B0 74 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR2W3Q7Z3T1 314 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 GLT6D1Q7Z4J2 308 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 DCXRQ7Z4W1 244 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SERPINA12Q8IW75 414 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 GTPBP8Q8N3Z3 284 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 KCNRGQ8N5I3 272 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 TRAM1L1Q8N609 369 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 COMMD1Q8N668 190 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 ARIH2OSQ8N7S6 290 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZNF248Q8NDW4 579 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR56B1Q8NGI3 324 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 DNAJB3Q8WWF6 145 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR8D1Q8WZ84 308 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 PHYHIPQ92561 330 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 TFGQ92734 400 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 THRSPQ92748 146 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 WBP2Q969T9 261 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 IMP4Q96G21 291 aaKnown RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 RBM18Q96H35 190 aaKnown RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 FAM218AQ96MZ4 157 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 MS4A4EQ96PG1 132 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 TSSK3Q96PN8 268 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZNF607Q96SK3 696 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 MED10Q9BTT4 135 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 NTMT1Q9BV86 223 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 GGACTQ9BVM4 153 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 PINK1Q9BXM7 581 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SYT4Q9H2B2 425 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR52A5Q9H2C5 316 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 MTHFD2LQ9H903 347 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 DBNDD1Q9H9R9 158 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 NOX3Q9HBY0 568 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 SIRT7Q9NRC8 400 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 PIGVQ9NUD9 493 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 CCDC88CQ9P219 2028 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 RASD1Q9Y272 281 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 ETV7Q9Y603 341 aa3.74□□□□□ -1.81
HMGB1P16-201ENST00000447155 NUP210Q8TEM1 1887 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 TRAV1-2A0A0B4J238 106 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 hCG_38984A0A1B0GV85 526 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 GNG14A0A1W2PPG7 69 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 C5orf51A6NDU8 294 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 MGAT4DA6NG13 374 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms