RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 PNLIPRP3Q17RR3 467 aa15.43■□□□□ 0.06
CDCP1-201ENST00000296129 SMRP1Q8NCR6 262 aa15.43■□□□□ 0.06
CDCP1-201ENST00000296129 OR2AK2Q8NG84 335 aa15.43■□□□□ 0.06
CDCP1-201ENST00000296129 LIN37Q96GY3 246 aaPredicted RBP15.43■□□□□ 0.06
CDCP1-201ENST00000296129 TECTBQ96PL2 329 aa15.43■□□□□ 0.06
CDCP1-201ENST00000296129 GNB4Q9HAV0 340 aa15.43■□□□□ 0.06
CDCP1-201ENST00000296129 ZNF705GA8MUZ8 300 aaPredicted RBP15.42■□□□□ 0.06
CDCP1-201ENST00000296129 TMEM127O75204 238 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 HEXAP06865 529 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 LIMS3P0CW19 117 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 LIMS4P0CW20 117 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 ADIRFQ15847 76 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 TIGD3Q6B0B8 471 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 MRM1Q6IN84 353 aaKnown RBP15.42■□□□□ 0.06
CDCP1-201ENST00000296129 CDC20BQ86Y33 519 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 FBXO4Q9UKT5 387 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 COL11A1P12107 1806 aaPredicted RBP15.42■□□□□ 0.06
CDCP1-201ENST00000296129 A0A1B0GTH9 108 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 TMEM272A0A1B0GTI8 110 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 A0A1W2PR80 420 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 IAPPP10997 89 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 CDH26Q8IXH8 852 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 AK3Q9UIJ7 227 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 ARID1BQ8NFD5 2236 aaPredicted RBP15.42■□□□□ 0.06
CDCP1-201ENST00000296129 OR4D11Q8NGI4 311 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 NDRG3Q9UGV2 375 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 TEX51A0A1B0GUA7 166 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 ARPC3O15145 178 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 MGST1P10620 155 aaKnown RBP15.42■□□□□ 0.06
CDCP1-201ENST00000296129 FGF9P31371 208 aaPredicted RBP15.42■□□□□ 0.06
CDCP1-201ENST00000296129 NAA40Q86UY6 237 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 TRAV17A0A0B4J275 112 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 ZFPL1O95159 310 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 NTN1O95631 604 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 RTL8BQ17RB0 113 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 C1orf87Q8N0U7 546 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 CYSLTR2Q9NS75 346 aa15.42■□□□□ 0.06
CDCP1-201ENST00000296129 TAGLN2P37802 199 aaKnown RBP15.41■□□□□ 0.06
CDCP1-201ENST00000296129 OR2A2Q6IF42 318 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 OR10D3Q8NH80 312 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 RNF150Q9ULK6 438 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 TOX3O15405 576 aaPredicted RBP15.41■□□□□ 0.06
CDCP1-201ENST00000296129 EPPINO95925 133 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 PTHLHP12272 177 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 RPL12P30050 165 aaKnown RBP15.41■□□□□ 0.06
CDCP1-201ENST00000296129 BTLAQ7Z6A9 289 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 DTWD2Q8NBA8 298 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 ZNF764Q96H86 408 aaPredicted RBP15.41■□□□□ 0.06
CDCP1-201ENST00000296129 SUB1P53999 127 aaKnown RBP eCLIP15.41■□□□□ 0.06
CDCP1-201ENST00000296129 RNPS1Q15287 305 aaKnown RBP15.41■□□□□ 0.06
CDCP1-201ENST00000296129 ZNF774Q6NX45 483 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 CT55Q8WUE5 264 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 C4orf45Q96LM5 186 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 C20orf24Q9BUV8 137 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 SERPINE3A8MV23 424 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 H2AFB1P0C5Y9 115 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 TOR2AQ5JU69 321 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 SMIM21Q3B7S5 101 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 WDR74Q6RFH5 385 aaPredicted RBP15.41■□□□□ 0.06
CDCP1-201ENST00000296129 CXorf67Q86X51 503 aaPredicted RBP15.41■□□□□ 0.06
CDCP1-201ENST00000296129 TMED6Q8WW62 240 aa15.41■□□□□ 0.06
CDCP1-201ENST00000296129 BTBD17A6NE02 478 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 HRKO00198 91 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 JTBO76095 146 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 MPZL1O95297 269 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 CRYABP02511 175 aaKnown RBP15.4■□□□□ 0.06
CDCP1-201ENST00000296129 PCMT1P22061 227 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 PEBP1P30086 187 aaKnown RBP15.4■□□□□ 0.06
CDCP1-201ENST00000296129 BATFQ16520 125 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 HES3Q5TGS1 186 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 C8orf82Q6P1X6 216 aaPredicted RBP15.4■□□□□ 0.06
CDCP1-201ENST00000296129 C17orf107Q6ZR85 190 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 ADAT1Q9BUB4 502 aaKnown RBP15.4■□□□□ 0.06
CDCP1-201ENST00000296129 TINAGL1Q9GZM7 467 aaPredicted RBP15.4■□□□□ 0.06
CDCP1-201ENST00000296129 C12orf10Q9HB07 376 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 MTCH1Q9NZJ7 389 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 HLA-HP01893 362 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 CD226Q15762 336 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 NLRC3Q7RTR2 1065 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 SLC35E1Q96K37 410 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 C2orf50Q96LR7 162 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 PIGMQ9H3S5 423 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 ZFP64Q9NPA5 681 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 SPRY3O43610 288 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 PDCD1Q15116 288 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 C17orf47Q8NEP4 570 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 RTN4IP1Q8WWV3 396 aaPredicted RBP15.4■□□□□ 0.06
CDCP1-201ENST00000296129 MRPS24Q96EL2 167 aaKnown RBP15.4■□□□□ 0.06
CDCP1-201ENST00000296129 LHX9Q9NQ69 397 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 PYCARD-AS1I3L0S3 204 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 RAC1P63000 192 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 PSG6Q00889 435 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 VSTM2LQ96N03 204 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 GSX2Q9BZM3 304 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 A0A1W2PQF6 199 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 MAGEB1P43366 347 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 GABRA4P48169 554 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 DHODHQ02127 395 aa15.4■□□□□ 0.06
CDCP1-201ENST00000296129 TRIP6Q15654 476 aaKnown RBP15.4■□□□□ 0.06
CDCP1-201ENST00000296129 DRAM2Q6UX65 266 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms