RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 AIFM2Q9BRQ8 373 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 ACTR6Q9GZN1 396 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 HES4Q9HCC6 221 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 INPP5EQ9NRR6 644 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 KLRF1Q9NZS2 232 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC35A3Q9Y2D2 325 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 RPH3AQ9Y2J0 694 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 H7C1Q1 480 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 ISG15P05161 165 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF43P17038 809 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 RPS23P62266 143 aaKnown RBP4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 MRPS10P82664 201 aaKnown RBP4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 TGFBR3Q03167 851 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF92Q03936 586 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 GABRA6Q16445 453 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 DDI2Q5TDH0 399 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 TMPPEQ6ZT21 453 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 CDH24Q86UP0 819 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 NOXA1Q86UR1 476 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 STX12Q86Y82 276 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 OR6Q1Q8NGQ2 317 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 GRPEL2Q8TAA5 225 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 TMEM170AQ8WVE7 144 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 DVL3Q92997 716 aaPredicted RBP4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 FOXRED1Q96CU9 486 aaPredicted RBP4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 UCK2Q9BZX2 261 aa4.78□□□□□ -1.65
TOPBP1-201ENST00000260810 ARPC4-TTLL3A0A0A6YYG9 625 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 hCG_38984A0A1B0GV85 526 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 L7N2F9 121 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 IGHV3-9P01782 118 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 VAMP2P63027 116 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 EIF2S3LQ2VIR3 472 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 ACSF3Q4G176 576 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 PHF19Q5T6S3 580 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 BEST4Q8NFU0 473 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 NEIL3Q8TAT5 605 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 BCL2L2Q92843 193 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 BTF3L4Q96K17 158 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 SPACA5Q96QH8 159 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 TSSK6Q9BXA6 273 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 SLC19A3Q9BZV2 496 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 ASF1BQ9NVP2 202 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 DAPK2Q9UIK4 370 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 DMRT1Q9Y5R6 373 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 A0A1W2PR80 420 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 NPIPA2E9PIF3 369 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 NPIPA3F8WFD2 350 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 ORC5O43913 435 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 SLC2A1P11166 492 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 SELLP14151 372 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF134P52741 427 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF841Q6ZN19 808 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 FAM89BQ8N5H3 189 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 OR8B12Q8NGG6 310 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 OR2AE1Q8NHA4 323 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 CNTNAP3BQ96NU0 1288 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 ALKBH3Q96Q83 286 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 URM1Q9BTM9 101 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 CNTNAP3Q9BZ76 1288 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 TAS2R8Q9NYW2 309 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 BOKQ9UMX3 212 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 RFNGQ9Y644 331 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 C12orf71A8MTZ7 269 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 LINC01387J3KSC0 135 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 MT-CO2P00403 227 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 CSTAP01040 98 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 CD14P08571 375 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 CYC1P08574 325 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 GLI4P10075 376 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 FCGR2AP12318 317 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 EGR1P18146 543 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 ELK1P19419 428 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 TCEA1P23193 301 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 CLRN1P58418 232 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 PRPS1P60891 318 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 FAM3AP98173 230 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 HLXQ14774 488 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 PLA1AQ53H76 456 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 GSG1LQ6UXU4 331 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 SLC16A14Q7RTX9 510 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 Q8N402 240 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 CELF2-AS1Q8N7Q2 184 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF565Q8N9K5 539 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 CLEC1AQ8NC01 280 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 PROKR2Q8NFJ6 384 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 OR9K2Q8NGE7 335 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 OR13C8Q8NGS7 320 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 OR2G2Q8NGZ5 317 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 ITFG2Q969R8 447 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 C4orf36Q96KX1 117 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 DEFB126Q9BYW3 111 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 BCL2L14Q9BZR8 327 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 TXNIPQ9H3M7 391 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 KCNIP1Q9NZI2 227 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 RNF212BA8MTL3 300 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 SSNA1O43805 119 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 LY6HO94772 140 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 HLA-DPB1P04440 258 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 OR8G3PP0DMU2 310 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 RORCP51449 518 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms