RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 OR14K1Q8NGZ2 314 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 PHF21AQ96BD5 680 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 SPSB1Q96BD6 273 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 ZNF775Q96BV0 537 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-201ENST00000238688 ITPKCQ96DU7 683 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 USB1Q9BQ65 265 aaKnown RBP11.48□□□□□ -0.57
SLIRP-201ENST00000238688 CHST5Q9GZS9 411 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 DIABLOQ9NR28 239 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 PLSCR4Q9NRQ2 329 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 RHBDL2Q9NX52 303 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 TAS2R4Q9NYW5 299 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 TACC2O95359 2948 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 EIF4EP06730 217 aaKnown RBP11.47□□□□□ -0.57
SLIRP-201ENST00000238688 CSF3P09919 207 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 SNRPBP14678 240 aaKnown RBP11.47□□□□□ -0.57
SLIRP-201ENST00000238688 COX5AP20674 150 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 ALDH3B1P43353 468 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 AP3S2P59780 193 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 IFITM3Q01628 133 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 RIPPLY1Q0D2K3 151 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 FAPQ12884 760 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 RSPO1Q2MKA7 263 aaPredicted RBP11.47□□□□□ -0.57
SLIRP-201ENST00000238688 PABPC1L2AQ5JQF8 200 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 HES5Q5TA89 166 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 OTPQ5XKR4 325 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 ZNF774Q6NX45 483 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 OR2W3Q7Z3T1 314 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 NUFIP2Q7Z417 695 aaKnown RBP11.47□□□□□ -0.57
SLIRP-201ENST00000238688 FTMTQ8N4E7 242 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 FAM169BQ8N8A8 192 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 PNLDC1Q8NA58 520 aaKnown RBP11.47□□□□□ -0.57
SLIRP-201ENST00000238688 POC5Q8NA72 575 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 OR4M1Q8NGD0 313 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 BCL2L2Q92843 193 aaPredicted RBP11.47□□□□□ -0.57
SLIRP-201ENST00000238688 APOBEC3DQ96AK3 386 aaPredicted RBP11.47□□□□□ -0.57
SLIRP-201ENST00000238688 FAM3DQ96BQ1 224 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 FGGYQ96C11 551 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 ZC3HAV1LQ96H79 300 aaKnown RBP11.47□□□□□ -0.57
SLIRP-201ENST00000238688 POM121Q96HA1 1249 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 TRIB1Q96RU8 372 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 SLC22A4Q9H015 551 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 RNF121Q9H920 327 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 FAIMQ9NVQ4 179 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 OR5V1Q9UGF6 321 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 F8P00451 2351 aa11.47□□□□□ -0.57
SLIRP-201ENST00000238688 OTOGQ6ZRI0 2925 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 AKAP9Q99996 3911 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 AKAP6Q13023 2319 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 METTL21EPA6NDL7 271 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 XRCC3O43542 346 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 ECDO95905 644 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-201ENST00000238688 PAHP00439 452 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 ITGA5P08648 1049 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 ARSBP15848 533 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 PRKACBP22694 351 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 INPP1P49441 399 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 MALLQ13021 153 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 CNN3Q15417 329 aaKnown RBP11.46□□□□□ -0.57
SLIRP-201ENST00000238688 OR8B8Q15620 311 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 RTL6Q6ICC9 239 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 ASPHD2Q6ICH7 369 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 SEMA6DQ8NFY4 1073 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 OR5L1Q8NGL2 311 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 SMIM4Q8WVI0 70 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 RFT1Q96AA3 541 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 SLC25A38Q96DW6 304 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 ZNF107Q9UII5 783 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-201ENST00000238688 RAB22AQ9UL26 194 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 FAM215AQ9Y5M1 114 aa11.46□□□□□ -0.57
SLIRP-201ENST00000238688 A0A1W2PQ09 198 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 CENPXA8MT69 81 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 GABARAPH6UMI1 98 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 SULT1C2O00338 296 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 IL18BPO95998 194 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 LCATP04180 440 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 GSTT2BP0CG30 244 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 COX6B1P14854 86 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 IGFBP2P18065 325 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 HOXC12P31275 282 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 POU3F4P49335 361 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 KRTAP10-9P60411 292 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 TFF3Q07654 80 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 DYRK1AQ13627 763 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 ARL6IP1Q15041 203 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 GSG1Q2KHT4 349 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 GLYATL3Q5SZD4 288 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 BEND4Q6ZU67 534 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 CMTM4Q8IZR5 234 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 DNAAF1Q8NEP3 725 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 CSNK2A3Q8NEV1 391 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 OR5H6Q8NGV6 325 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 SYNPRQ8TBG9 265 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 PPP1R14AQ96A00 147 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 SLC25A28Q96A46 364 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 ADAT3Q96EY9 351 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-201ENST00000238688 SFXN3Q9BWM7 321 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 TP63Q9H3D4 680 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-201ENST00000238688 NPDC1Q9NQX5 325 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-201ENST00000238688 B3GNT2Q9NY97 397 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 TAS2R8Q9NYW2 309 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms