RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ANKRD37Q7Z713 158 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 NSG2Q9Y328 171 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 A0A1W2PRD5 423 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 A0A1W2PRF3 423 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 A0A1W2PRM7 423 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 F5H697 171 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 PDGFBP01127 241 aaPredicted RBP11.91□□□□□ -0.5
COL1A1-201ENST00000225964 IGLV3-27P01718 113 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 TMIGD3P0DMS9 266 aaPredicted RBP11.91□□□□□ -0.5
COL1A1-201ENST00000225964 CNN1P51911 297 aaKnown RBP11.91□□□□□ -0.5
COL1A1-201ENST00000225964 SSPNQ14714 243 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 LILRB4Q8NHJ6 448 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 GNRHR2Q96P88 292 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 RPL12P30050 165 aaKnown RBP11.91□□□□□ -0.5
COL1A1-201ENST00000225964 EIF3IQ13347 325 aaKnown RBP11.91□□□□□ -0.5
COL1A1-201ENST00000225964 TMEM179BQ7Z7N9 219 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 CDH26Q8IXH8 852 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 UBALD1Q8TB05 177 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 LHX4Q969G2 390 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 TMEM147Q9BVK8 224 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 TBX21Q9UL17 535 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 MEX3AA1L020 520 aaKnown RBP11.91□□□□□ -0.5
COL1A1-201ENST00000225964 H7BYZ3 331 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 PPP1R2P9O14990 202 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 LYZL6O75951 148 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 RRASP10301 218 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 ZNF17P17021 662 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 CA6P23280 308 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 KIAA0141Q14154 515 aaPredicted RBP11.91□□□□□ -0.5
COL1A1-201ENST00000225964 KPTNQ9Y664 436 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 OR5H8P0DN80 308 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 CEACAM6P40199 344 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 RNF151Q2KHN1 245 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 CYHR1Q6ZMK1 362 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 CADM4Q8NFZ8 388 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 TGIF2Q9GZN2 237 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 TMEM231Q9H6L2 316 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 SOX15O60248 233 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 SULT1C4O75897 302 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 CDK5Q00535 292 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 IL11RAQ14626 422 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 ZNF788Q6ZQV5 615 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 SFTPA2Q8IWL1 248 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 SFTPA1Q8IWL2 248 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 DPF1Q92782 380 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 ARHGDIGQ99819 225 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 B9D1Q9UPM9 204 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 ITGB4P16144 1822 aa11.91□□□□□ -0.5
COL1A1-201ENST00000225964 A0A087WUJ7 227 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 LINC01387J3KSC0 135 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 CXCL10P02778 98 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 TMEM267Q0VDI3 215 aaPredicted RBP11.9□□□□□ -0.5
COL1A1-201ENST00000225964 KIRREL2Q6UWL6 708 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 TMEM108Q6UXF1 575 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 OR10Z1Q8NGY1 313 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 OR6S1Q8NH40 331 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 A0A0A6YYD5 115 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 CLEC12BQ2HXU8 276 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 OR2T2Q6IF00 324 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 LYSMD2Q8IV50 215 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 OR2M5A3KFT3 312 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 HSPB2A8KAH6 182 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 ATP6V1G2-DDX39BF2Z307 99 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 AQP8O94778 261 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 HSPB2Q16082 182 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 LYG1Q8N1E2 194 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 OR1L3Q8NH93 324 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 KTI12Q96EK9 354 aaPredicted RBP11.9□□□□□ -0.5
COL1A1-201ENST00000225964 DUS3LQ96G46 650 aaKnown RBP11.9□□□□□ -0.5
COL1A1-201ENST00000225964 TMEM56Q96MV1 263 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 ICAM5Q9UMF0 924 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 LAMB1P07942 1786 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 A0A0A6YYJ9 748 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 M0R296 226 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 PPM1DO15297 605 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 PRRX1P54821 245 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 TM4SF19Q96DZ7 209 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 OCEL1Q9H607 264 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 SIAEQ9HAT2 523 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 GIPP09681 153 aaPredicted RBP11.9□□□□□ -0.5
COL1A1-201ENST00000225964 PTBP1P26599 531 aaKnown RBP eCLIP11.9□□□□□ -0.5
COL1A1-201ENST00000225964 SYT6Q5T7P8 510 aaPredicted RBP11.9□□□□□ -0.5
COL1A1-201ENST00000225964 OR4S1Q8NGB4 309 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 OR2I1PQ8NGU4 316 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 RXFP4Q8TDU9 374 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 LINC00615Q96LM1 132 aaPredicted RBP11.9□□□□□ -0.5
COL1A1-201ENST00000225964 SLC25A32Q9H2D1 315 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 TREM2Q9NZC2 230 aa11.9□□□□□ -0.5
COL1A1-201ENST00000225964 DCAF16Q9NXF7 216 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 RNF24Q9Y225 148 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 ETHE1O95571 254 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 EPHA2P29317 976 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 RTP5Q14D33 572 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 LINC01465Q8N7H1 131 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 OR52N4Q8NGI2 321 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 SMIM19Q96E16 107 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 NKX6-2Q9C056 277 aaPredicted RBP11.89□□□□□ -0.51
COL1A1-201ENST00000225964 FLVCR2Q9UPI3 526 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 ASB1Q9Y576 335 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 POMT1Q9Y6A1 747 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms