RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 UBA7P41226 1012 aa19.27■□□□□ 0.68
CACNA1A-253ENST00000637927 CCDC155Q8N6L0 562 aa19.27■□□□□ 0.68
CACNA1A-253ENST00000637927 DBF4Q9UBU7 674 aaPredicted RBP19.27■□□□□ 0.68
CACNA1A-253ENST00000637927 PPP4R3BQ5MIZ7 849 aa19.27■□□□□ 0.68
CACNA1A-253ENST00000637927 ATRIPQ8WXE1 791 aa19.27■□□□□ 0.68
CACNA1A-253ENST00000637927 EVI5LQ96CN4 794 aa19.27■□□□□ 0.68
CACNA1A-253ENST00000637927 SPECC1LQ69YQ0 1117 aa19.27■□□□□ 0.68
CACNA1A-253ENST00000637927 PHAXQ9H814 394 aaKnown RBP19.27■□□□□ 0.68
CACNA1A-253ENST00000637927 CEP57Q86XR8 500 aa19.27■□□□□ 0.67
CACNA1A-253ENST00000637927 SUDS3Q9H7L9 328 aaPredicted RBP19.27■□□□□ 0.67
CACNA1A-253ENST00000637927 NOL3O60936 208 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-253ENST00000637927 HELBQ8NG08 1087 aaPredicted RBP19.26■□□□□ 0.67
CACNA1A-253ENST00000637927 ADGRF5Q8IZF2 1346 aa19.26■□□□□ 0.67
CACNA1A-253ENST00000637927 CHMP6Q96FZ7 201 aa19.26■□□□□ 0.67
CACNA1A-253ENST00000637927 MNAT1P51948 309 aa19.26■□□□□ 0.67
CACNA1A-253ENST00000637927 MIGA1Q8NAN2 632 aa19.26■□□□□ 0.67
CACNA1A-253ENST00000637927 BEGAINQ9BUH8 593 aa19.26■□□□□ 0.67
CACNA1A-253ENST00000637927 CCDC24Q8N4L8 307 aa19.26■□□□□ 0.67
CACNA1A-253ENST00000637927 RSPH14Q9UHP6 348 aa19.26■□□□□ 0.67
CACNA1A-253ENST00000637927 E7EVH7 732 aa19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 PRPF31Q8WWY3 499 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 NEK1Q96PY6 1258 aa19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 RAPGEF1Q13905 1077 aa19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 GIMAP6Q6P9H5 292 aa19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 CRNKL1Q9BZJ0 848 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 WASLO00401 505 aaPredicted RBP19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 HMGB1P09429 215 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 SFMBT1Q9UHJ3 866 aa19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 TBC1D9Q6ZT07 1266 aa19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 METTL14Q9HCE5 456 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 SYNJ1O43426 1573 aa19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 ZEB2O60315 1214 aa19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 TRIM27P14373 513 aa19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 MCM6Q14566 821 aa19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 MSL1Q68DK7 614 aa19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 ZKSCAN3Q9BRR0 538 aa19.25■□□□□ 0.67
CACNA1A-253ENST00000637927 CCDC152Q4G0S7 254 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 TNPO1Q92973 898 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 MBIPQ9NS73 344 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 CCDC89Q8N998 374 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 KIF18AQ8NI77 898 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 FEZ2Q9UHY8 353 aaPredicted RBP19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 KLF18A0A0U1RQI7 1052 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 IFNL2Q8IZJ0 200 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 UBAP1LF5GYI3 381 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 RIOK3O14730 519 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 STX17P56962 302 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 DCLK2Q8N568 766 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 FAM200AQ8TCP9 573 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 WHAMMQ8TF30 809 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 WTAPQ15007 396 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 BSPRYQ5W0U4 402 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 OGFOD1Q8N543 542 aa19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 NAA15Q9BXJ9 866 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 NIP7Q9Y221 180 aaKnown RBP eCLIP19.24■□□□□ 0.67
CACNA1A-253ENST00000637927 PPP1R7Q15435 360 aa19.23■□□□□ 0.67
CACNA1A-253ENST00000637927 NCOA7Q8NI08 942 aa19.23■□□□□ 0.67
CACNA1A-253ENST00000637927 TTC21AQ8NDW8 1320 aa19.23■□□□□ 0.67
CACNA1A-253ENST00000637927 GMNNO75496 209 aa19.23■□□□□ 0.67
CACNA1A-253ENST00000637927 MAN1A1P33908 653 aa19.23■□□□□ 0.67
CACNA1A-253ENST00000637927 MRC2Q9UBG0 1479 aa19.23■□□□□ 0.67
CACNA1A-253ENST00000637927 AMPD3Q01432 767 aa19.23■□□□□ 0.67
CACNA1A-253ENST00000637927 ADCY5O95622 1261 aa19.23■□□□□ 0.67
CACNA1A-253ENST00000637927 CNGA1P29973 690 aa19.23■□□□□ 0.67
CACNA1A-253ENST00000637927 KARSQ15046 597 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-253ENST00000637927 MCM7P33993 719 aa19.23■□□□□ 0.67
CACNA1A-253ENST00000637927 TFCP2L1Q9NZI6 479 aa19.23■□□□□ 0.67
CACNA1A-253ENST00000637927 NAPAP54920 295 aa19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 LRRC59Q96AG4 307 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 PA2G4Q9UQ80 394 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 ESPNB1AK53 854 aa19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 KIF22Q14807 665 aa19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 N4BP3O15049 544 aa19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 GNG11P61952 73 aa19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 GOLGA6CA6NDK9 693 aa19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 GOLGA6BA6NDN3 693 aa19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 GOLGA6DP0CG33 693 aa19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 STXBP4Q6ZWJ1 553 aa19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 SMC6Q96SB8 1091 aa19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 GOLGA6AQ9NYA3 693 aa19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 SPAG5Q96R06 1193 aa19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 IMPG2Q9BZV3 1241 aa19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 MAGED2Q9UNF1 606 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 LMOD1P29536 600 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-253ENST00000637927 MYCLP12524 364 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-253ENST00000637927 SH2B1Q9NRF2 756 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-253ENST00000637927 KIF5AQ12840 1032 aa19.21■□□□□ 0.67
CACNA1A-253ENST00000637927 GTPBP4Q9BZE4 634 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-253ENST00000637927 XAGE3Q8WTP9 111 aa19.21■□□□□ 0.67
CACNA1A-253ENST00000637927 NKTRP30414 1462 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-253ENST00000637927 PLEKHH2Q8IVE3 1493 aa19.21■□□□□ 0.67
CACNA1A-253ENST00000637927 AKR1B10O60218 316 aa19.21■□□□□ 0.67
CACNA1A-253ENST00000637927 UBLCP1Q8WVY7 318 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-253ENST00000637927 SCAND2PQ9GZW5 306 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-253ENST00000637927 USTQ9Y2C2 406 aa19.21■□□□□ 0.67
CACNA1A-253ENST00000637927 FAM114A2Q9NRY5 505 aa19.21■□□□□ 0.67
CACNA1A-253ENST00000637927 HDAC9Q9UKV0 1011 aa19.21■□□□□ 0.67
CACNA1A-253ENST00000637927 CKAP4Q07065 602 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 STX1AQ16623 288 aa19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 GBP3Q9H0R5 595 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 1198.6 ms