RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 UBAC1Q9BSL1 405 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 SLC26A6Q9BXS9 759 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 NACAP1Q9BZK3 213 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 ZSWIM4Q9H7M6 989 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 MRVI1Q9Y6F6 885 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 POLR3GO15318 223 aaPredicted RBP7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 NEMFO60524 1076 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 XBP1P17861 261 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 TMEM67Q5HYA8 995 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 SLC9C2Q5TAH2 1124 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 FAM89AQ96GI7 184 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 TMOD3Q9NYL9 352 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 DNAI1Q9UI46 699 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 SLC12A7Q9Y666 1083 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 MYO3AQ8NEV4 1616 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 KAT6BQ8WYB5 2073 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 CBFA2T2O43439 604 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 GSDMDP57764 484 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 SKIDA1Q1XH10 827 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 GOLGA6L1Q8N7Z2 621 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 TRERF1Q96PN7 1200 aa7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 CGNQ9P2M7 1197 aaKnown RBP7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 IQSEC3Q9UPP2 1182 aaPredicted RBP7.96□□□□□ -1.14
SYNPO2-206ENST00000610556 MYO5BQ9ULV0 1848 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 CHGBP05060 677 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 CYP21A2P08686 494 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 ATP5JP18859 108 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 UBASH3AP57075 661 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 FAM160A1Q05DH4 1040 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 PPFIBP1Q86W92 1011 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 KCNG4Q8TDN1 519 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 SLC52A2Q9HAB3 445 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 RAI14Q9P0K7 980 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 SETD1AO15047 1707 aaKnown RBP7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 KDRP35968 1356 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 STARD3NLO95772 234 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 ATP2B3Q16720 1220 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 EPHA10Q5JZY3 1008 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 SYT10Q6XYQ8 523 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 CCP110O43303 1012 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 IPO7O95373 1038 aaKnown RBP7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 SCRN1Q12765 414 aa7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 MAPK8IP2Q13387 824 aaPredicted RBP7.95□□□□□ -1.14
SYNPO2-206ENST00000610556 MARCH6O60337 910 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 FILIP1LQ4L180 1135 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 KIAA1524Q8TCG1 905 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 BRMS1Q9HCU9 246 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 PODXL2Q9NZ53 605 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 AK9Q5TCS8 1911 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 ANKRD18BA2A2Z9 1011 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 E7EWF7 191 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 EYA2O00167 538 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 GPS2Q13227 327 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 SPECC1Q5M775 1068 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 CCDC102BQ68D86 513 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 TMCO3Q6UWJ1 677 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 DCAF5Q96JK2 942 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 TAF6LQ9Y6J9 622 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 KIF2AO00139 706 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 ZBTB43O43298 467 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 RAD21O60216 631 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 GNG11P61952 73 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 LRRC24Q50LG9 513 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 TTLL7Q6ZT98 887 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 ZCRB1Q8TBF4 217 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 MYL10Q9BUA6 226 aa7.94□□□□□ -1.14
SYNPO2-206ENST00000610556 SSRP1Q08945 709 aaKnown RBP7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 CACTINQ8WUQ7 758 aaKnown RBP7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 IGKV5-2P06315 115 aa7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 ARID5BQ14865 1188 aa7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 SLC4A8Q2Y0W8 1093 aa7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 BICDL1Q6ZP65 573 aa7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 PLBD2Q8NHP8 589 aa7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 PHKBQ93100 1093 aa7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 ZKSCAN3Q9BRR0 538 aa7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 GPHNQ9NQX3 736 aaPredicted RBP7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 SETD1BQ9UPS6 1966 aaKnown RBP7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 B4E1Z4 1266 aa7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 RANBP6O60518 1105 aaKnown RBP7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 MAP3K12Q12852 859 aa7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 C11orf57Q6ZUT1 292 aaPredicted RBP7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 TMEM87AQ8NBN3 555 aa7.93□□□□□ -1.14
SYNPO2-206ENST00000610556 AGLP35573 1532 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 SLU7O95391 586 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 HSPD1P10809 573 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 AFMP43652 599 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 PUS3Q9BZE2 481 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 HELLSQ9NRZ9 838 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 RPAP1Q9BWH6 1393 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 CCDC66A2RUB6 948 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 ZFYP08048 801 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 ZAP70P43403 619 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 TOB2Q14106 344 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 ELF2Q15723 593 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 PTPN21Q16825 1174 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 ARHGEF25Q86VW2 580 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 CCDC150Q8NCX0 1101 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 XAGE2Q96GT9 111 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 DACH1Q9UI36 760 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 PLEKHG1Q9ULL1 1385 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms