RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 COL11A2P13942 1736 aaPredicted RBP11.44□□□□□ -0.58
VPS25-205ENST00000590339 TRIM6-TRIM34B2RNG4 842 aa11.44□□□□□ -0.58
VPS25-205ENST00000590339 SLC4A3P48751 1232 aa11.44□□□□□ -0.58
VPS25-205ENST00000590339 HTRA3P83110 453 aa11.44□□□□□ -0.58
VPS25-205ENST00000590339 CNTROBQ8N137 903 aa11.44□□□□□ -0.58
VPS25-205ENST00000590339 JDP2Q8WYK2 163 aa11.44□□□□□ -0.58
VPS25-205ENST00000590339 EYA2O00167 538 aa11.43□□□□□ -0.58
VPS25-205ENST00000590339 IRS4O14654 1257 aaPredicted RBP11.43□□□□□ -0.58
VPS25-205ENST00000590339 BBOX1O75936 387 aa11.43□□□□□ -0.58
VPS25-205ENST00000590339 IL15P40933 162 aaPredicted RBP11.43□□□□□ -0.58
VPS25-205ENST00000590339 TFCP2Q12800 502 aa11.43□□□□□ -0.58
VPS25-205ENST00000590339 FSTL1Q12841 308 aa11.43□□□□□ -0.58
VPS25-205ENST00000590339 LARGE2Q8N3Y3 721 aa11.43□□□□□ -0.58
VPS25-205ENST00000590339 SMC1BQ8NDV3 1235 aa11.43□□□□□ -0.58
VPS25-205ENST00000590339 RILPL2Q969X0 211 aa11.43□□□□□ -0.58
VPS25-205ENST00000590339 DAXXQ9UER7 740 aaPredicted RBP11.43□□□□□ -0.58
VPS25-205ENST00000590339 DBNLQ9UJU6 430 aaKnown RBP11.43□□□□□ -0.58
VPS25-205ENST00000590339 ATP6V0A2Q9Y487 856 aa11.43□□□□□ -0.58
VPS25-205ENST00000590339 GJA3Q9Y6H8 435 aa11.43□□□□□ -0.58
VPS25-205ENST00000590339 ZNF541Q9H0D2 1346 aa11.42□□□□□ -0.58
VPS25-205ENST00000590339 APLP1P51693 650 aa11.42□□□□□ -0.58
VPS25-205ENST00000590339 CTSWP56202 376 aa11.42□□□□□ -0.58
VPS25-205ENST00000590339 GRAPQ13588 217 aa11.42□□□□□ -0.58
VPS25-205ENST00000590339 GRAPLQ8TC17 118 aaPredicted RBP11.42□□□□□ -0.58
VPS25-205ENST00000590339 CCDC85AQ96PX6 553 aaPredicted RBP11.42□□□□□ -0.58
VPS25-205ENST00000590339 PSMD1Q99460 953 aa11.42□□□□□ -0.58
VPS25-205ENST00000590339 CCDC8Q9H0W5 538 aaPredicted RBP11.42□□□□□ -0.58
VPS25-205ENST00000590339 IL25Q9H293 177 aa11.42□□□□□ -0.58
VPS25-205ENST00000590339 RTL9Q8NET4 1388 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 DLEC1Q9Y238 1755 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 FZD9O00144 591 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 SGSM2O43147 1006 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 PPIP5K2O43314 1243 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 POTEIP0CG38 1075 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 POTEJP0CG39 1038 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 ATP5JP18859 108 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 EIF6P56537 245 aaKnown RBP11.41□□□□□ -0.58
VPS25-205ENST00000590339 RABEP1Q15276 862 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 AOC3Q16853 763 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 GRIPAP1Q4V328 841 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 EAPPQ56P03 285 aaPredicted RBP11.41□□□□□ -0.58
VPS25-205ENST00000590339 DPP8Q6V1X1 898 aaPredicted RBP11.41□□□□□ -0.58
VPS25-205ENST00000590339 SP8Q8IXZ3 490 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 MPNDQ8N594 471 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 CELF1Q92879 486 aaKnown RBP11.41□□□□□ -0.58
VPS25-205ENST00000590339 EVI5LQ96CN4 794 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 ANTXR1Q9H6X2 564 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 SNRKQ9NRH2 765 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 CHMP3Q9Y3E7 222 aa11.41□□□□□ -0.58
VPS25-205ENST00000590339 RAD50Q92878 1312 aa11.4□□□□□ -0.58
VPS25-205ENST00000590339 TNRC6CQ9HCJ0 1690 aaKnown RBP11.4□□□□□ -0.58
VPS25-205ENST00000590339 PDE8AO60658 829 aa11.4□□□□□ -0.58
VPS25-205ENST00000590339 MAP4K4O95819 1239 aaPredicted RBP11.4□□□□□ -0.58
VPS25-205ENST00000590339 SF3B3Q15393 1217 aaKnown RBP11.4□□□□□ -0.58
VPS25-205ENST00000590339 LRRC24Q50LG9 513 aa11.4□□□□□ -0.58
VPS25-205ENST00000590339 HSCBQ8IWL3 235 aa11.4□□□□□ -0.58
VPS25-205ENST00000590339 NIM1KQ8IY84 436 aa11.4□□□□□ -0.58
VPS25-205ENST00000590339 TTLL11Q8NHH1 800 aa11.4□□□□□ -0.58
VPS25-205ENST00000590339 NSFL1CQ9UNZ2 370 aaKnown RBP11.4□□□□□ -0.58
VPS25-205ENST00000590339 CLEC11AQ9Y240 323 aa11.4□□□□□ -0.58
VPS25-205ENST00000590339 MED23Q9ULK4 1368 aa11.4□□□□□ -0.59
VPS25-205ENST00000590339 MYH7P12883 1935 aa11.39□□□□□ -0.59
VPS25-205ENST00000590339 IQCA1LA6NCM1 817 aa11.39□□□□□ -0.59
VPS25-205ENST00000590339 SBF1O95248 1867 aa11.39□□□□□ -0.59
VPS25-205ENST00000590339 ANAPC15P60006 121 aa11.39□□□□□ -0.59
VPS25-205ENST00000590339 SUPT20HQ8NEM7 779 aa11.39□□□□□ -0.59
VPS25-205ENST00000590339 ZNF594Q96JF6 807 aaPredicted RBP11.39□□□□□ -0.59
VPS25-205ENST00000590339 DBNDD2Q9BQY9 259 aa11.39□□□□□ -0.59
VPS25-205ENST00000590339 TAF1DQ9H5J8 278 aaPredicted RBP11.39□□□□□ -0.59
VPS25-205ENST00000590339 SEC31BQ9NQW1 1179 aa11.39□□□□□ -0.59
VPS25-205ENST00000590339 COL4A1P02462 1669 aa11.39□□□□□ -0.59
VPS25-205ENST00000590339 AKAP11Q9UKA4 1901 aa11.39□□□□□ -0.59
VPS25-205ENST00000590339 HIP1O00291 1037 aa11.38□□□□□ -0.59
VPS25-205ENST00000590339 RIMBP2O15034 1052 aa11.38□□□□□ -0.59
VPS25-205ENST00000590339 CD2BP2O95400 341 aaKnown RBP11.38□□□□□ -0.59
VPS25-205ENST00000590339 EPHX2P34913 555 aa11.38□□□□□ -0.59
VPS25-205ENST00000590339 RPS8P62241 208 aaKnown RBP11.38□□□□□ -0.59
VPS25-205ENST00000590339 CCDC57Q2TAC2 916 aa11.38□□□□□ -0.59
VPS25-205ENST00000590339 CHADLQ6NUI6 762 aa11.38□□□□□ -0.59
VPS25-205ENST00000590339 GPC2Q8N158 579 aa11.38□□□□□ -0.59
VPS25-205ENST00000590339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.38□□□□□ -0.59
VPS25-205ENST00000590339 PUS3Q9BZE2 481 aaKnown RBP11.38□□□□□ -0.59
VPS25-205ENST00000590339 LSG1Q9H089 658 aaKnown RBP11.38□□□□□ -0.59
VPS25-205ENST00000590339 GREM2Q9H772 168 aa11.38□□□□□ -0.59
VPS25-205ENST00000590339 HACL1Q9UJ83 578 aa11.38□□□□□ -0.59
VPS25-205ENST00000590339 DOCK2Q92608 1830 aa11.37□□□□□ -0.59
VPS25-205ENST00000590339 C6orf229H3BNL8 230 aa11.37□□□□□ -0.59
VPS25-205ENST00000590339 HSP90B1P14625 803 aaKnown RBP11.37□□□□□ -0.59
VPS25-205ENST00000590339 MCCP23508 829 aa11.37□□□□□ -0.59
VPS25-205ENST00000590339 DDIT3P35638 169 aa11.37□□□□□ -0.59
VPS25-205ENST00000590339 GPSM2P81274 684 aa11.37□□□□□ -0.59
VPS25-205ENST00000590339 IFIT5Q13325 482 aaKnown RBP11.37□□□□□ -0.59
VPS25-205ENST00000590339 TICAM2Q86XR7 235 aa11.37□□□□□ -0.59
VPS25-205ENST00000590339 DNAJC5GQ8N7S2 189 aa11.37□□□□□ -0.59
VPS25-205ENST00000590339 RUFY2Q8WXA3 655 aa11.37□□□□□ -0.59
VPS25-205ENST00000590339 L3MBTL3Q96JM7 780 aaPredicted RBP11.37□□□□□ -0.59
VPS25-205ENST00000590339 HAUS7Q99871 368 aa11.37□□□□□ -0.59
VPS25-205ENST00000590339 ANO2Q9NQ90 1003 aa11.37□□□□□ -0.59
VPS25-205ENST00000590339 DIAPH3Q9NSV4 1193 aa11.37□□□□□ -0.59
VPS25-205ENST00000590339 SNED1Q8TER0 1413 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 710.9 ms