RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 TAF1CQ15572 869 aaPredicted RBP3.27□□□□□ -1.89
SNORD53-201ENST00000579969 CDCA8Q53HL2 280 aa3.27□□□□□ -1.89
SNORD53-201ENST00000579969 RSBN1LQ6PCB5 846 aaPredicted RBP3.27□□□□□ -1.89
SNORD53-201ENST00000579969 TMC4Q7Z404 712 aa3.27□□□□□ -1.89
SNORD53-201ENST00000579969 PPP1R42Q7Z4L9 355 aa3.27□□□□□ -1.89
SNORD53-201ENST00000579969 ZNF34Q8IZ26 560 aa3.27□□□□□ -1.89
SNORD53-201ENST00000579969 RAET1EQ8TD07 263 aa3.27□□□□□ -1.89
SNORD53-201ENST00000579969 CNKSR2Q8WXI2 1034 aa3.27□□□□□ -1.89
SNORD53-201ENST00000579969 PAWRQ96IZ0 340 aaKnown RBP3.27□□□□□ -1.89
SNORD53-201ENST00000579969 CLMNQ96JQ2 1002 aa3.27□□□□□ -1.89
SNORD53-201ENST00000579969 GMLQ99445 158 aa3.27□□□□□ -1.89
SNORD53-201ENST00000579969 EYA3Q99504 573 aa3.27□□□□□ -1.89
SNORD53-201ENST00000579969 ARHGAP39Q9C0H5 1083 aa3.27□□□□□ -1.89
SNORD53-201ENST00000579969 SEMA6BQ9H3T3 888 aa3.27□□□□□ -1.89
SNORD53-201ENST00000579969 POLLQ9UGP5 575 aa3.27□□□□□ -1.89
SNORD53-201ENST00000579969 ZNF609O15014 1411 aa3.27□□□□□ -1.89
SNORD53-201ENST00000579969 GNAT3A8MTJ3 354 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 WNT10BO00744 389 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 TLR2O60603 784 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 WDHD1O75717 1129 aaPredicted RBP3.26□□□□□ -1.89
SNORD53-201ENST00000579969 NTSR2O95665 410 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 HCLS1P14317 486 aaPredicted RBP3.26□□□□□ -1.89
SNORD53-201ENST00000579969 SYN1P17600 705 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 CAPN2P17655 700 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 GJA5P36382 358 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 PSMC4P43686 418 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 LACTBP83111 547 aaPredicted RBP3.26□□□□□ -1.89
SNORD53-201ENST00000579969 GRAPQ13588 217 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 MAP3K11Q16584 847 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 ZNF697Q5TEC3 545 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 TTLL7Q6ZT98 887 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 NECAB2Q7Z6G3 386 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 C7orf61Q8IZ16 206 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 OGFOD1Q8N543 542 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 GRAPLQ8TC17 118 aaPredicted RBP3.26□□□□□ -1.89
SNORD53-201ENST00000579969 MS4A4AQ96JQ5 239 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 TRIM47Q96LD4 638 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 UTP14AQ9BVJ6 771 aaKnown RBP3.26□□□□□ -1.89
SNORD53-201ENST00000579969 C1QTNF1Q9BXJ1 281 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 PCGF6Q9BYE7 350 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 UNC93B1Q9H1C4 597 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 SRRDQ9UH36 339 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 RRP7AQ9Y3A4 280 aaKnown RBP3.26□□□□□ -1.89
SNORD53-201ENST00000579969 RIPOR2Q9Y4F9 1068 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 CACNA1GO43497 2377 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 RIC1Q4ADV7 1423 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 EYSQ5T1H1 3165 aa3.26□□□□□ -1.89
SNORD53-201ENST00000579969 MUC6Q6W4X9 2439 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 MAP3K15Q6ZN16 1313 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 UBN2Q6ZU65 1347 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 SCN7AQ01118 1682 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 CCL15-CCL14A0A0B4J2E2 113 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 USP2O75604 605 aaPredicted RBP3.25□□□□□ -1.89
SNORD53-201ENST00000579969 FMNL1O95466 1100 aaPredicted RBP3.25□□□□□ -1.89
SNORD53-201ENST00000579969 IREB2P48200 963 aaKnown RBP3.25□□□□□ -1.89
SNORD53-201ENST00000579969 GPSM2P81274 684 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 CCL15Q16663 113 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 SUPT20HL1Q3ZLR7 823 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 PARP10Q53GL7 1025 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 KIF6Q6ZMV9 814 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 MORC1Q86VD1 984 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 APOBEC3FQ8IUX4 373 aaKnown RBP3.25□□□□□ -1.89
SNORD53-201ENST00000579969 HELBQ8NG08 1087 aaPredicted RBP3.25□□□□□ -1.89
SNORD53-201ENST00000579969 TBC1D16Q8TBP0 767 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 BRI3BPQ8WY22 251 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 MYLIPQ8WY64 445 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 DEFB118Q96PH6 123 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 P2RX7Q99572 595 aaKnown RBP3.25□□□□□ -1.89
SNORD53-201ENST00000579969 LRFN3Q9BTN0 628 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 DEFB129Q9H1M3 183 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 ZBTB3Q9H5J0 574 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 HCN4Q9Y3Q4 1203 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 LAMA2P24043 3122 aaKnown RBP3.25□□□□□ -1.89
SNORD53-201ENST00000579969 MYO9BQ13459 2157 aa3.25□□□□□ -1.89
SNORD53-201ENST00000579969 TAF1P21675 1872 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 USP17L3A6NCW0 530 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 USP17L4A6NCW7 530 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 SASH1O94885 1247 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 FOSL2P15408 326 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 OSBPP22059 807 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 CTGFP29279 349 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 MMP14P50281 582 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 GTF2A2P52657 109 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 RPS8P62241 208 aaKnown RBP3.24□□□□□ -1.89
SNORD53-201ENST00000579969 MDM2Q00987 491 aaPredicted RBP3.24□□□□□ -1.89
SNORD53-201ENST00000579969 TRIM26Q12899 539 aaPredicted RBP3.24□□□□□ -1.89
SNORD53-201ENST00000579969 NBPF12Q5TAG4 269 aaPredicted RBP3.24□□□□□ -1.89
SNORD53-201ENST00000579969 C17orf99Q6UX52 265 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 GIGYF2Q6Y7W6 1299 aaKnown RBP3.24□□□□□ -1.89
SNORD53-201ENST00000579969 USP17L1Q7RTZ2 530 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 PODNQ7Z5L7 613 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 ANKRD13AQ8IZ07 590 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 FAM43AQ8N2R8 423 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 ATXN2LQ8WWM7 1075 aaKnown RBP3.24□□□□□ -1.89
SNORD53-201ENST00000579969 CELF1Q92879 486 aaKnown RBP3.24□□□□□ -1.89
SNORD53-201ENST00000579969 OPTNQ96CV9 577 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 UHRF1Q96T88 793 aaPredicted RBP3.24□□□□□ -1.89
SNORD53-201ENST00000579969 MXD3Q9BW11 206 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 NBPF3Q9H094 633 aa3.24□□□□□ -1.89
SNORD53-201ENST00000579969 CRISPLD2Q9H0B8 497 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms