RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 PHLDB3Q6NSJ2 640 aa7.52□□□□□ -1.21
CTNNA1-239ENST00000523685 MRPL14Q6P1L8 145 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-239ENST00000523685 TOM1L2Q6ZVM7 507 aa7.52□□□□□ -1.21
CTNNA1-239ENST00000523685 GAS2L2Q8NHY3 880 aa7.52□□□□□ -1.21
CTNNA1-239ENST00000523685 SCG3Q8WXD2 468 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-239ENST00000523685 INSM2Q96T92 566 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-239ENST00000523685 CABP1Q9NZU7 370 aa7.52□□□□□ -1.21
CTNNA1-239ENST00000523685 USP19O94966 1318 aa7.52□□□□□ -1.21
CTNNA1-239ENST00000523685 CENPJQ9HC77 1338 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-239ENST00000523685 NRKQ7Z2Y5 1582 aa7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 CPDO75976 1380 aa7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 AXIN1O15169 862 aa7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 BMP2P12643 396 aa7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 IGFBP4P22692 258 aa7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 GPC1P35052 558 aa7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 FOXK2Q01167 660 aa7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 C6orf118Q5T5N4 469 aa7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 ZSCAN10Q96SZ4 725 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 FHDC1Q9C0D6 1143 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 TSPAN10Q9H1Z9 355 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 SPON1Q9HCB6 807 aa7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 CXXC1Q9P0U4 656 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 THRAP3Q9Y2W1 955 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-239ENST00000523685 COL5A2P05997 1499 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-239ENST00000523685 KCNQ2O43526 872 aa7.5□□□□□ -1.21
CTNNA1-239ENST00000523685 GTF2E1P29083 439 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-239ENST00000523685 RNF144AP50876 292 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-239ENST00000523685 TRIM26Q12899 539 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-239ENST00000523685 SCARF1Q14162 830 aa7.5□□□□□ -1.21
CTNNA1-239ENST00000523685 DDB1Q16531 1140 aa7.5□□□□□ -1.21
CTNNA1-239ENST00000523685 PTF1AQ7RTS3 328 aa7.5□□□□□ -1.21
CTNNA1-239ENST00000523685 SLC9A9Q8IVB4 645 aa7.5□□□□□ -1.21
CTNNA1-239ENST00000523685 CRIPAKQ8N1N5 446 aa7.5□□□□□ -1.21
CTNNA1-239ENST00000523685 C1orf216Q8TAB5 229 aa7.5□□□□□ -1.21
CTNNA1-239ENST00000523685 GRIP2Q9C0E4 1043 aa7.5□□□□□ -1.21
CTNNA1-239ENST00000523685 CRB1P82279 1406 aa7.5□□□□□ -1.21
CTNNA1-239ENST00000523685 TOPAZ1Q8N9V7 1692 aa7.49□□□□□ -1.21
CTNNA1-239ENST00000523685 C21orf2O43822 256 aa7.49□□□□□ -1.21
CTNNA1-239ENST00000523685 ARID4AP29374 1257 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-239ENST00000523685 CTSOP43234 321 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-239ENST00000523685 SLC27A3Q5K4L6 730 aa7.49□□□□□ -1.21
CTNNA1-239ENST00000523685 TBCELQ5QJ74 424 aa7.49□□□□□ -1.21
CTNNA1-239ENST00000523685 NBPF15Q8N660 670 aa7.49□□□□□ -1.21
CTNNA1-239ENST00000523685 IRX2Q9BZI1 471 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-239ENST00000523685 POLMQ9NP87 494 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-239ENST00000523685 IQSEC3Q9UPP2 1182 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-239ENST00000523685 OVOS2A0A0G2JMS6 1433 aa7.49□□□□□ -1.21
CTNNA1-239ENST00000523685 OVOS2A0A0J9YW53 1432 aa7.49□□□□□ -1.21
CTNNA1-239ENST00000523685 OVOS2Q6IE36 1432 aa7.49□□□□□ -1.21
CTNNA1-239ENST00000523685 LMO7Q8WWI1 1683 aa7.48□□□□□ -1.21
CTNNA1-239ENST00000523685 C11orf95C9JLR9 678 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-239ENST00000523685 PPP1R12BO60237 982 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-239ENST00000523685 ZBTB7AO95365 584 aa7.48□□□□□ -1.21
CTNNA1-239ENST00000523685 USP6P35125 1406 aa7.48□□□□□ -1.21
CTNNA1-239ENST00000523685 TMEM214Q6NUQ4 689 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-239ENST00000523685 TAS1R3Q7RTX0 852 aa7.48□□□□□ -1.21
CTNNA1-239ENST00000523685 TRIM46Q7Z4K8 759 aa7.48□□□□□ -1.21
CTNNA1-239ENST00000523685 PURBQ96QR8 312 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-239ENST00000523685 AATKQ6ZMQ8 1374 aa7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 NUP188Q5SRE5 1749 aa7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 BMP1P13497 986 aa7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 PSMA6P60900 246 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 FKBP5Q13451 457 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 STAG2Q8N3U4 1231 aa7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 MARCH10Q8NA82 808 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 CCER1Q8TC90 406 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 PDGFDQ9GZP0 370 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.47□□□□□ -1.216e-7■■■■■ 62.1
CTNNA1-239ENST00000523685 MTMR7Q9Y216 660 aa7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 CHMP3Q9Y3E7 222 aa7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 USP3Q9Y6I4 520 aa7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 RREB1Q92766 1687 aa7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 EVC2Q86UK5 1308 aa7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 WDR17Q8IZU2 1322 aa7.47□□□□□ -1.21
CTNNA1-239ENST00000523685 BRD4O60885 1362 aaPredicted RBP7.46□□□□□ -1.21
CTNNA1-239ENST00000523685 PLSCR1O15162 318 aa7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 NEUROD1Q13562 356 aa7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 GNASQ5JWF2 1037 aa7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 FOXD4L5Q5VV16 416 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 RHBDD1Q8TEB9 315 aa7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 L3MBTL2Q969R5 705 aa7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 VTI1AQ96AJ9 217 aa7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 ZFP42Q96MM3 310 aa7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 C2orf49Q9BVC5 232 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 NIFKQ9BYG3 293 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 AAASQ9NRG9 546 aa7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 STK32BQ9NY57 414 aa7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 GNEQ9Y223 722 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 TTC21BQ7Z4L5 1316 aa7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 NINLQ9Y2I6 1382 aa7.46□□□□□ -1.22
CTNNA1-239ENST00000523685 PARP4Q9UKK3 1724 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 SERTM1A2A2V5 107 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 TTLL8A6PVC2 850 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 EXOC5O00471 708 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 ST8SIA5O15466 376 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 PTCD1O75127 700 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 NOS2P35228 1153 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 SCNN1AP37088 669 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 TEAD4Q15561 434 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 TXNRD1Q16881 649 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms