RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 GLIS2Q9BZE0 524 aaPredicted RBP16.48■□□□□ 0.23
CDK7-213ENST00000515391 PUS3Q9BZE2 481 aaKnown RBP16.48■□□□□ 0.23
CDK7-213ENST00000515391 USP44Q9H0E7 712 aa16.48■□□□□ 0.23
CDK7-213ENST00000515391 TMEM88BA6NKF7 163 aa16.47■□□□□ 0.23
CDK7-213ENST00000515391 KCNJ4P48050 445 aa16.47■□□□□ 0.23
CDK7-213ENST00000515391 RSBN1LQ6PCB5 846 aaPredicted RBP16.47■□□□□ 0.23
CDK7-213ENST00000515391 DLK2Q6UY11 383 aa16.47■□□□□ 0.23
CDK7-213ENST00000515391 LDHAL6AQ6ZMR3 332 aa16.47■□□□□ 0.23
CDK7-213ENST00000515391 PODNQ7Z5L7 613 aa16.47■□□□□ 0.23
CDK7-213ENST00000515391 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
CDK7-213ENST00000515391 FBXW7Q969H0 707 aa16.47■□□□□ 0.23
CDK7-213ENST00000515391 CNNM1Q9NRU3 951 aa16.47■□□□□ 0.23
CDK7-213ENST00000515391 A0A1B0GUL6 1792 aa16.46■□□□□ 0.23
CDK7-213ENST00000515391 USP17L3A6NCW0 530 aa16.46■□□□□ 0.23
CDK7-213ENST00000515391 USP17L4A6NCW7 530 aa16.46■□□□□ 0.23
CDK7-213ENST00000515391 RPS12P25398 132 aaKnown RBP16.46■□□□□ 0.23
CDK7-213ENST00000515391 USP17L1Q7RTZ2 530 aa16.46■□□□□ 0.23
CDK7-213ENST00000515391 CEP350Q5VT06 3117 aa16.46■□□□□ 0.23
CDK7-213ENST00000515391 PSME4Q14997 1843 aa16.45■□□□□ 0.22
CDK7-213ENST00000515391 RABL6Q3YEC7 729 aaPredicted RBP16.45■□□□□ 0.22
CDK7-213ENST00000515391 JMYQ8N9B5 988 aa16.45■□□□□ 0.22
CDK7-213ENST00000515391 COA1Q9GZY4 146 aa16.45■□□□□ 0.22
CDK7-213ENST00000515391 PGAP2Q9UHJ9 254 aa16.45■□□□□ 0.22
CDK7-213ENST00000515391 ASTN2O75129 1339 aaPredicted RBP16.45■□□□□ 0.22
CDK7-213ENST00000515391 IRS2Q9Y4H2 1338 aa16.45■□□□□ 0.22
CDK7-213ENST00000515391 BCAR3O75815 825 aa16.44■□□□□ 0.22
CDK7-213ENST00000515391 BRPF1P55201 1214 aaPredicted RBP16.44■□□□□ 0.22
CDK7-213ENST00000515391 KLHDC4Q8TBB5 520 aa16.44■□□□□ 0.22
CDK7-213ENST00000515391 GMLQ99445 158 aa16.44■□□□□ 0.22
CDK7-213ENST00000515391 API5Q9BZZ5 524 aaKnown RBP16.44■□□□□ 0.22
CDK7-213ENST00000515391 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
CDK7-213ENST00000515391 KIF4BQ2VIQ3 1234 aa16.43■□□□□ 0.22
CDK7-213ENST00000515391 LRRC24Q50LG9 513 aa16.43■□□□□ 0.22
CDK7-213ENST00000515391 DACT2Q5SW24 774 aa16.43■□□□□ 0.22
CDK7-213ENST00000515391 CST9Q5W186 159 aa16.43■□□□□ 0.22
CDK7-213ENST00000515391 USP48Q86UV5 1035 aa16.43■□□□□ 0.22
CDK7-213ENST00000515391 AGBL3Q8NEM8 1001 aa16.43■□□□□ 0.22
CDK7-213ENST00000515391 ZC3H15Q8WU90 426 aaKnown RBP16.43■□□□□ 0.22
CDK7-213ENST00000515391 CD209Q9NNX6 404 aa16.43■□□□□ 0.22
CDK7-213ENST00000515391 ZNF646O15015 1829 aaPredicted RBP16.42■□□□□ 0.22
CDK7-213ENST00000515391 POLR2AP24928 1970 aaKnown RBP16.42■□□□□ 0.22
CDK7-213ENST00000515391 CNTNAP1P78357 1384 aa16.42■□□□□ 0.22
CDK7-213ENST00000515391 GTF2IP78347 998 aa16.42■□□□□ 0.22
CDK7-213ENST00000515391 ABT1Q9ULW3 272 aaKnown RBP16.42■□□□□ 0.22
CDK7-213ENST00000515391 USP17L8P0C7I0 530 aa16.41■□□□□ 0.22
CDK7-213ENST00000515391 ZNF280AP59817 542 aaPredicted RBP16.41■□□□□ 0.22
CDK7-213ENST00000515391 STRIP1Q5VSL9 837 aa16.41■□□□□ 0.22
CDK7-213ENST00000515391 TTLL5Q6EMB2 1281 aa16.41■□□□□ 0.22
CDK7-213ENST00000515391 CDC37L1Q7L3B6 337 aa16.41■□□□□ 0.22
CDK7-213ENST00000515391 FRAT1Q92837 279 aaPredicted RBP16.41■□□□□ 0.22
CDK7-213ENST00000515391 ZNF408Q9H9D4 720 aa16.41■□□□□ 0.22
CDK7-213ENST00000515391 RIPOR2Q9Y4F9 1068 aa16.41■□□□□ 0.22
CDK7-213ENST00000515391 TRPM7Q96QT4 1865 aa16.41■□□□□ 0.22
CDK7-213ENST00000515391 ADM5C9JUS6 153 aa16.4■□□□□ 0.22
CDK7-213ENST00000515391 CELF2O95319 508 aaKnown RBP16.4■□□□□ 0.22
CDK7-213ENST00000515391 UBTFL1P0CB47 393 aaPredicted RBP16.4■□□□□ 0.22
CDK7-213ENST00000515391 VEGFBP49765 207 aa16.4■□□□□ 0.22
CDK7-213ENST00000515391 SCARF1Q14162 830 aa16.4■□□□□ 0.22
CDK7-213ENST00000515391 DEFB115Q30KQ5 88 aa16.4■□□□□ 0.22
CDK7-213ENST00000515391 C15orf52Q6ZUT6 534 aaKnown RBP16.4■□□□□ 0.22
CDK7-213ENST00000515391 MYOZ2Q9NPC6 264 aa16.4■□□□□ 0.22
CDK7-213ENST00000515391 JAG2Q9Y219 1238 aa16.4■□□□□ 0.22
CDK7-213ENST00000515391 ZNF609O15014 1411 aa16.39■□□□□ 0.21
CDK7-213ENST00000515391 RFX5P48382 616 aaPredicted RBP16.39■□□□□ 0.21
CDK7-213ENST00000515391 KRT26Q7Z3Y9 468 aa16.39■□□□□ 0.21
CDK7-213ENST00000515391 DCPSQ96C86 337 aaKnown RBP16.39■□□□□ 0.21
CDK7-213ENST00000515391 MEIS3Q99687 375 aa16.39■□□□□ 0.21
CDK7-213ENST00000515391 GGA3Q9NZ52 723 aa16.39■□□□□ 0.21
CDK7-213ENST00000515391 SCAF8Q9UPN6 1271 aaKnown RBP16.39■□□□□ 0.21
CDK7-213ENST00000515391 LRRFIP2Q9Y608 721 aaKnown RBP16.39■□□□□ 0.21
CDK7-213ENST00000515391 KIF16BQ96L93 1317 aa16.39■□□□□ 0.21
CDK7-213ENST00000515391 RASSF10A6NK89 507 aa16.38■□□□□ 0.21
CDK7-213ENST00000515391 GYG1P46976 350 aa16.38■□□□□ 0.21
CDK7-213ENST00000515391 METTL24Q5JXM2 366 aa16.38■□□□□ 0.21
CDK7-213ENST00000515391 ANGEL2Q5VTE6 544 aaKnown RBP16.38■□□□□ 0.21
CDK7-213ENST00000515391 ZNF804AQ7Z570 1209 aa16.38■□□□□ 0.21
CDK7-213ENST00000515391 KIAA0825Q8IV33 1275 aa16.38■□□□□ 0.21
CDK7-213ENST00000515391 CERS5Q8N5B7 392 aa16.38■□□□□ 0.21
CDK7-213ENST00000515391 ARHGAP45Q92619 1136 aa16.38■□□□□ 0.21
CDK7-213ENST00000515391 CLUAP1Q96AJ1 413 aa16.38■□□□□ 0.21
CDK7-213ENST00000515391 HSPA1AP0DMV8 641 aaKnown RBP16.37■□□□□ 0.21
CDK7-213ENST00000515391 HSPA1BP0DMV9 641 aaKnown RBP16.37■□□□□ 0.21
CDK7-213ENST00000515391 TRIM27P14373 513 aa16.37■□□□□ 0.21
CDK7-213ENST00000515391 IL1R1P14778 569 aa16.37■□□□□ 0.21
CDK7-213ENST00000515391 GRM1Q13255 1194 aa16.37■□□□□ 0.21
CDK7-213ENST00000515391 UBE4AQ14139 1066 aa16.37■□□□□ 0.21
CDK7-213ENST00000515391 NBPF9Q3BBW0 867 aa16.37■□□□□ 0.21
CDK7-213ENST00000515391 INTS3Q68E01 1043 aaKnown RBP16.37■□□□□ 0.21
CDK7-213ENST00000515391 PAXIP1Q6ZW49 1069 aaPredicted RBP16.37■□□□□ 0.21
CDK7-213ENST00000515391 TLL2Q9Y6L7 1015 aa16.37■□□□□ 0.21
CDK7-213ENST00000515391 MROH5Q6ZUA9 1318 aa16.37■□□□□ 0.21
CDK7-213ENST00000515391 PTPN12Q05209 780 aaKnown RBP16.36■□□□□ 0.21
CDK7-213ENST00000515391 CYP4F22Q6NT55 531 aa16.36■□□□□ 0.21
CDK7-213ENST00000515391 FAM84BQ96KN1 310 aaPredicted RBP16.36■□□□□ 0.21
CDK7-213ENST00000515391 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
CDK7-213ENST00000515391 MYO3BQ8WXR4 1341 aa16.36■□□□□ 0.21
CDK7-213ENST00000515391 F8W031 263 aaPredicted RBP16.35■□□□□ 0.21
CDK7-213ENST00000515391 IPO8O15397 1037 aaKnown RBP16.35■□□□□ 0.21
CDK7-213ENST00000515391 SASH1O94885 1247 aa16.35■□□□□ 0.21
CDK7-213ENST00000515391 HIBADHP31937 336 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms