RNA–Protein interactions for RNA: ENST00000412164.1

HMGN2P35-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 35, humanhuman

BASIC

Gene HMGN2P35, Length 270 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P35-201ENST00000412164 DDB1Q16531 1140 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 PTPROQ16827 1216 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 KIAA0753Q2KHM9 967 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 KIF4BQ2VIQ3 1234 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 IFFO2Q5TF58 517 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 CDCA2Q69YH5 1023 aaPredicted RBP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 CLEC17AQ6ZS10 378 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 WAPLQ7Z5K2 1190 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 TMEM110Q86TL2 294 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 LCA5Q86VQ0 697 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 GAS2L3Q86XJ1 694 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 PARP9Q8IXQ6 854 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 RPAP2Q8IXW5 612 aaPredicted RBP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 PEX5LQ8IYB4 626 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 HS6ST3Q8IZP7 471 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 NDUFAF2Q8N183 169 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 ARL10Q8N8L6 244 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 TRIML1Q8N9V2 468 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 SMYD1Q8NB12 490 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 C3orf20Q8ND61 904 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 PPM1EQ8WY54 764 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 EZH1Q92800 747 aaPredicted RBP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 IL17RAQ96F46 866 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 VMP1Q96GC9 406 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 SLC39A13Q96H72 371 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 DHTKD1Q96HY7 919 aaPredicted RBP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 RSRC1Q96IZ7 334 aaKnown RBP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 CDHR1Q96JP9 859 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 SPACA7Q96KW9 195 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 RNPC3Q96LT9 517 aaKnown RBP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 TTC14Q96N46 770 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 IWS1Q96ST2 819 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 SLC39A3Q9BRY0 314 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 UTP14AQ9BVJ6 771 aaKnown RBP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 LNPKQ9C0E8 428 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 MMADHCQ9H3L0 296 aaPredicted RBP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 ZSCAN16Q9H4T2 348 aaPredicted RBP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 CD248Q9HCU0 757 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 CASS4Q9NQ75 786 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 PICK1Q9NRD5 415 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 SPTLC3Q9NUV7 552 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 DCAF16Q9NXF7 216 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 MKRN1Q9UHC7 482 aaKnown RBP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 XPO7Q9UIA9 1087 aaKnown RBP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 MCM8Q9UJA3 840 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 SERPINA10Q9UK55 444 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 ZNF777Q9ULD5 760 aaPredicted RBP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 COG6Q9Y2V7 657 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 SQORQ9Y6N5 450 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 DHX57Q6P158 1386 aaKnown RBP3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 YEATS2Q9ULM3 1422 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 NCOA3Q9Y6Q9 1424 aa3.1□□□□□ -1.91
HMGN2P35-201ENST00000412164 TMEM238LA0A1B0GVL6 79 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 TBKBP1A7MCY6 615 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 PER1O15534 1290 aaPredicted RBP3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 SGTAO43765 313 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 RGS20O76081 388 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 RBP3P10745 1247 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 BTF3P20290 206 aaKnown RBP3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 YY1P25490 414 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 PSMA3P25788 255 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 USP8P40818 1118 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 SLC4A3P48751 1232 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 NASPP49321 788 aaPredicted RBP3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 ZNF131P52739 623 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 CSE1LP55060 971 aaKnown RBP3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 HDAC4P56524 1084 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 TBX4P57082 545 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 FOXK1P85037 733 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 ADCY1Q08828 1119 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 NCBP1Q09161 790 aaKnown RBP3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 PPP2R5BQ15173 497 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 CNGA3Q16281 694 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 DBN1Q16643 649 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 CCDC144BQ3MJ40 725 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 SLFNL1Q499Z3 407 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 TTC39BQ5VTQ0 682 aaPredicted RBP3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 KANK3Q6NY19 840 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 PDXDC1Q6P996 788 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 NOP9Q86U38 636 aaKnown RBP3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 ANKRD18AQ8IVF6 992 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 CCDC65Q8IXS2 484 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 CHCHD4Q8N4Q1 142 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 ATP11CQ8NB49 1132 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 FBXO18Q8NFZ0 1043 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 FAM76AQ8TAV0 307 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 GOLGA5Q8TBA6 731 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 PARD3BQ8TEW8 1205 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 ANKRD24Q8TF21 1146 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 JARID2Q92833 1246 aaPredicted RBP3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 EXOC4Q96A65 974 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 JAKMIP2Q96AA8 810 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 SH3GL1Q99961 368 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 CAPS2Q9BXY5 557 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 TSGA10Q9BZW7 698 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 TANGO6Q9C0B7 1094 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 PDGFDQ9GZP0 370 aaPredicted RBP3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 BRD8Q9H0E9 1235 aa3.09□□□□□ -1.91
HMGN2P35-201ENST00000412164 SPC25Q9HBM1 224 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms