RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 ZBTB3Q9H5J0 574 aa15.56■□□□□ 0.08
NCDN-201ENST00000356090 CTNNA3Q9UI47 895 aa15.56■□□□□ 0.08
NCDN-201ENST00000356090 MED23Q9ULK4 1368 aa15.55■□□□□ 0.08
NCDN-201ENST00000356090 GOLGA8BA8MQT2 603 aa15.55■□□□□ 0.08
NCDN-201ENST00000356090 SERPINC1P01008 464 aa15.55■□□□□ 0.08
NCDN-201ENST00000356090 DPCR1Q3MIW9 517 aa15.55■□□□□ 0.08
NCDN-201ENST00000356090 RALYLQ86SE5 291 aaKnown RBP15.55■□□□□ 0.08
NCDN-201ENST00000356090 XPO4Q9C0E2 1151 aaKnown RBP15.55■□□□□ 0.08
NCDN-201ENST00000356090 PCDHA7Q9UN72 937 aa15.55■□□□□ 0.08
NCDN-201ENST00000356090 NPHP4O75161 1426 aaPredicted RBP15.55■□□□□ 0.08
NCDN-201ENST00000356090 FAM208AQ9UK61 1670 aaKnown RBP15.55■□□□□ 0.08
NCDN-201ENST00000356090 SLC3A2P08195 630 aaKnown RBP15.55■□□□□ 0.08
NCDN-201ENST00000356090 NDUFA8P51970 172 aa15.55■□□□□ 0.08
NCDN-201ENST00000356090 TRERF1Q96PN7 1200 aa15.55■□□□□ 0.08
NCDN-201ENST00000356090 ORC3Q9UBD5 711 aaPredicted RBP15.55■□□□□ 0.08
NCDN-201ENST00000356090 AXIN2Q9Y2T1 843 aa15.55■□□□□ 0.08
NCDN-201ENST00000356090 CAVIN2O95810 425 aa15.55■□□□□ 0.08
NCDN-201ENST00000356090 PDILTQ8N807 584 aa15.55■□□□□ 0.08
NCDN-201ENST00000356090 E7EWF7 191 aa15.54■□□□□ 0.08
NCDN-201ENST00000356090 ERCC6LQ2NKX8 1250 aa15.54■□□□□ 0.08
NCDN-201ENST00000356090 KBTBD3Q8NAB2 608 aa15.54■□□□□ 0.08
NCDN-201ENST00000356090 KLF18A0A0U1RQI7 1052 aa15.54■□□□□ 0.08
NCDN-201ENST00000356090 PFKFB2O60825 505 aa15.54■□□□□ 0.08
NCDN-201ENST00000356090 HMGB1P09429 215 aaKnown RBP15.54■□□□□ 0.08
NCDN-201ENST00000356090 ATP2B1P20020 1258 aa15.54■□□□□ 0.08
NCDN-201ENST00000356090 MAPK8IP2Q13387 824 aaPredicted RBP15.54■□□□□ 0.08
NCDN-201ENST00000356090 CFAP100Q494V2 611 aa15.54■□□□□ 0.08
NCDN-201ENST00000356090 KRT222Q8N1A0 295 aa15.54■□□□□ 0.08
NCDN-201ENST00000356090 MRFAP1L1Q96HT8 127 aa15.54■□□□□ 0.08
NCDN-201ENST00000356090 CLIC4Q9Y696 253 aa15.54■□□□□ 0.08
NCDN-201ENST00000356090 DIP2BQ9P265 1576 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 ZNF609O15014 1411 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 NEMFO60524 1076 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 SLU7O95391 586 aaKnown RBP15.53■□□□□ 0.08
NCDN-201ENST00000356090 MNS1Q8NEH6 495 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 ST7Q9NRC1 585 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 DNAI1Q9UI46 699 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 COL15A1P39059 1388 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 GOLGA8FQ08AF8 430 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 GOLGA8DPQ0D2H9 430 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 KMT5BQ4FZB7 885 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 ZNF397Q8NF99 534 aaPredicted RBP15.53■□□□□ 0.08
NCDN-201ENST00000356090 RCOR1Q9UKL0 485 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 CTDNEP1O95476 244 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 TATP17735 454 aaPredicted RBP15.53■□□□□ 0.08
NCDN-201ENST00000356090 CHRNA2Q15822 529 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 FBXO38Q6PIJ6 1188 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 RGPD1P0DJD0 1748 aa15.53■□□□□ 0.08
NCDN-201ENST00000356090 AGLP35573 1532 aa15.52■□□□□ 0.08
NCDN-201ENST00000356090 URI1O94763 535 aaPredicted RBP15.52■□□□□ 0.08
NCDN-201ENST00000356090 KIF20AO95235 890 aa15.52■□□□□ 0.07
NCDN-201ENST00000356090 PDIA3P30101 505 aaKnown RBP15.52■□□□□ 0.07
NCDN-201ENST00000356090 NAA16Q6N069 864 aaPredicted RBP15.52■□□□□ 0.07
NCDN-201ENST00000356090 DHX40Q8IX18 779 aaKnown RBP15.52■□□□□ 0.07
NCDN-201ENST00000356090 TOMM22Q9NS69 142 aa15.52■□□□□ 0.07
NCDN-201ENST00000356090 SPTLC2O15270 562 aa15.52■□□□□ 0.07
NCDN-201ENST00000356090 HSPD1P10809 573 aaKnown RBP15.52■□□□□ 0.07
NCDN-201ENST00000356090 PDIA6Q15084 440 aa15.52■□□□□ 0.07
NCDN-201ENST00000356090 HAUS7Q99871 368 aa15.52■□□□□ 0.07
NCDN-201ENST00000356090 COPRSQ9NQ92 184 aa15.52■□□□□ 0.07
NCDN-201ENST00000356090 CABP4P57796 275 aa15.51■□□□□ 0.07
NCDN-201ENST00000356090 CABLES1Q8TDN4 633 aa15.51■□□□□ 0.07
NCDN-201ENST00000356090 DIP2AQ14689 1571 aa15.51■□□□□ 0.07
NCDN-201ENST00000356090 RGPD8O14715 1765 aaPredicted RBP15.51■□□□□ 0.07
NCDN-201ENST00000356090 POLR3GO15318 223 aaPredicted RBP15.51■□□□□ 0.07
NCDN-201ENST00000356090 GSDMDP57764 484 aa15.51■□□□□ 0.07
NCDN-201ENST00000356090 LRRC24Q50LG9 513 aa15.51■□□□□ 0.07
NCDN-201ENST00000356090 TTC39AQ5SRH9 613 aa15.51■□□□□ 0.07
NCDN-201ENST00000356090 RBM43Q6ZSC3 357 aaKnown RBP15.51■□□□□ 0.07
NCDN-201ENST00000356090 SNRPA1P09661 255 aaKnown RBP15.5■□□□□ 0.07
NCDN-201ENST00000356090 PXDNQ92626 1479 aa15.5■□□□□ 0.07
NCDN-201ENST00000356090 CCZ1BP86790 482 aa15.5■□□□□ 0.07
NCDN-201ENST00000356090 CCZ1P86791 482 aaPredicted RBP15.5■□□□□ 0.07
NCDN-201ENST00000356090 CCDC82Q8N4S0 544 aa15.5■□□□□ 0.07
NCDN-201ENST00000356090 LLPHQ9BRT6 129 aaKnown RBP15.5■□□□□ 0.07
NCDN-201ENST00000356090 DDX41Q9UJV9 622 aaKnown RBP15.5■□□□□ 0.07
NCDN-201ENST00000356090 PRC1O43663 620 aa15.5■□□□□ 0.07
NCDN-201ENST00000356090 ARHGAP29Q52LW3 1261 aa15.5■□□□□ 0.07
NCDN-201ENST00000356090 NFXL1Q6ZNB6 911 aa15.5■□□□□ 0.07
NCDN-201ENST00000356090 IMMTQ16891 758 aaKnown RBP15.49■□□□□ 0.07
NCDN-201ENST00000356090 USPL1Q5W0Q7 1092 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 UBXN4Q92575 508 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 ERO1AQ96HE7 468 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 SLC52A2Q9HAB3 445 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 KIAA1468Q9P260 1216 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 CEP126Q9P2H0 1117 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 ZNF202O95125 648 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 ATP1A3P13637 1013 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 CDK11BP21127 795 aaKnown RBP15.49■□□□□ 0.07
NCDN-201ENST00000356090 ADD1P35611 737 aaKnown RBP15.49■□□□□ 0.07
NCDN-201ENST00000356090 TRDNQ13061 729 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 DDX17Q92841 729 aaKnown RBP15.49■□□□□ 0.07
NCDN-201ENST00000356090 AIFM3Q96NN9 605 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 A0A1B0GUL7 405 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 CDC25BP30305 580 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 TSGA10IPQ3SY00 556 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 ARHGEF25Q86VW2 580 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 CREBRFQ8IUR6 639 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 SMARCC2Q8TAQ2 1214 aa15.49■□□□□ 0.07
NCDN-201ENST00000356090 FMN2Q9NZ56 1722 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms